| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2799 |
|---|
| Symbol | |
|---|
| ID | 8334148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 3214942 |
|---|
| End bp | 3215265 |
|---|
| Gene Length | 324 bp |
|---|
| Protein Length | 107 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644955947 |
|---|
| Product | anti-sigma-factor antagonist |
|---|
| Protein accession | YP_003113553 |
|---|
| Protein GI | 256391989 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.674674 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGGAGT TCTCCTACCG GGTCCGCGAG CAGGATTCGG TCAGCGTGGT CGAGGTGTCC
GGTGATGTGG ACATGTCGGT GGCCGGGCAG CTGAGCGGAG TGCTCGAGCC GCTGGTCGCT
GCCGGGGACG TGGTTGTGGA CTGTACGGCG GTGACGTTCT TCGACTCCAT GGGCTTGCGG
GTGGCCGTGG ACGCGATGAA CAGGGCCGGG CAGGCCGGCA CGGCGTTCTC CCTGGTGCCC
TCGCAGATGG TCGCGCGGGT GCTGGAGCTG GCCGGGGTGA GCGGGCTCTT CGTCATCCAC
GACAGCGTCC CGACGTCAGC GTGA
|
|---|
| Protein sequence | MREFSYRVRE QDSVSVVEVS GDVDMSVAGQ LSGVLEPLVA AGDVVVDCTA VTFFDSMGLR
VAVDAMNRAG QAGTAFSLVP SQMVARVLEL AGVSGLFVIH DSVPTSA
|
|---|
| |