Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2797 |
Symbol | |
ID | 8334146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3211458 |
End bp | 3213209 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644955945 |
Product | histidine kinase |
Protein accession | YP_003113551 |
Protein GI | 256391987 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGCG CCATGGACAC CACGCTTCAT CTGGCAGCGA TCGCCGGAGA GCAGGACGTC TTCGCTCTCC GGCGGGTCGC CCGGACCGTC TCGGAGATCG CCGGAACCGA TCGCCAGGAC CAGATCCGGC TGGCGACGGC GCTCAGTGAG CTGGGCCGGG ACCGGTTGGG AAGCAGCGGG GTGACAGTGC GCTTCGCCCT CGTCGCCCGG CCCTCGCCGG CTTTGGAGGT GACGATCCGC TGGAGGGACG GCGCGCCCCC GGCCGCGGAG GCGCTGGATT CCGCCCGGCG GCTGGTCCGC GACCTGTCCA GCGAGGCGGC GGGCCGGCAG GGCAGCATCG TGCTGCGCCA GCCGGTCCCG CTCAGGGCGG ACGGCTTCGC CGAAGCGGTG TCCCGGCTGT CCGAGGCGCT GGACGAGGAG CAGACCACCA ACCGGGAAGA CGATCTGCGG GCCCAGACCA AAGACCTGAT CCTCGCTCTC GAGCACGCCC GGGTTCAGAG CGAGGAACTC CAGCTTCTCA ACGACGAGCT CGAGCAGACC AATGCCGGTG TCCTGGCGCT GTACGCGGAG ATCTCCTCCG AGCTGGAGCA GACCAACATC GGCGTCGTGG CGCTCCACGC CGAGCTGGAG GACAAGAGCC GGCAGCTGCG GGAGGCCAGT GAGACCAAGA CCCGTTTCTG GGCCAACGTC AGCCACGAGT TGCGCAGCCC GCTGAACTCG GTGATCGGGC TCAGCCAACT GCTGGCCGAC TCGACCCCCG AGGAACTGGG GGAGCAGCAG CGCCACCAGG TCGGCCTCAT CGCCGCCTCG GGAGAGACGC TGCGCGTGCT GGTCGACGAC CTGCTCGACG TGGCCAAGGC GGAGGCCGGA CAGCTCATCC CGCAACTGGC TCCGGTCGAC CTGGCTTTGT TGCTCGCGCA GATCGAATCC GTGGTCCAGC CGTCGGCTCC GAGCCCCGAG GTCGCCGTCC TGTTCCCCGA TCCGGCCGGC CTGCCCACGC TGGTCACCGA CGAGATGATG CTCACCAGGG TCCTGCGCAA CCTGATCAGC AACAGCCTGA AGTTCACCAG CAGCGGCCAC GTCCGGCTGA GCGTCCGATG CCTCGAGGAA CCGCCAGGCA CGGTCGAGTT CACCGTCGAG GACACCGGCA TCGGCATCCC GCCGCAGGAG CAGACGAAGG TTTTCGAGGA GTTCCACCAG GTGCGAGGTG CTCACCAGCG CGGCAAAGCG GGCACCGGAC TGGGCCTTCC CTATGCGCGC AGCCTGGTGA TACTGCTCGG CGGTACCATC TCCCTGGCCA GCGAGGTCGG TCACGGAACG ACGGTCACCG TCACCCTGCC GGGTTCTCCC GCGCAGGAGC CGGACGAACA AGCGCGACTG CCGCTGATCG CCAGCGCGGA TGACGATCCG GCGTTCGCCG CCGTGTTCCG GCCGGTCCTG GAAGCCGTCG CCGAACGGGT GGTGCAGGTG CCCGGCGGCG TGGAGCTCCT GGAGTTCGTC ATGCGGGAGA AGCCCGCGGC GATCATCATG GACTTGAACA TGCCGGACGT GGATGGTTAC GAAACGATCC GTCGCCTGGC TGATTCCGAA GAGACCGCAG CCGTGCCGGT CGTCGTCGTC ACCGGCTATC CGCTGACGCA CGTCGACCGC GCGCGTCTGG GACACGCCCG CGCGGTGCTG AACAAGGATG CCGTGGACGC CCAGGAACTA CGTCGAGCGC TCGGTTCACG GTTCGAGGAG GGGACAGCAT GA
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Protein sequence | MTGAMDTTLH LAAIAGEQDV FALRRVARTV SEIAGTDRQD QIRLATALSE LGRDRLGSSG VTVRFALVAR PSPALEVTIR WRDGAPPAAE ALDSARRLVR DLSSEAAGRQ GSIVLRQPVP LRADGFAEAV SRLSEALDEE QTTNREDDLR AQTKDLILAL EHARVQSEEL QLLNDELEQT NAGVLALYAE ISSELEQTNI GVVALHAELE DKSRQLREAS ETKTRFWANV SHELRSPLNS VIGLSQLLAD STPEELGEQQ RHQVGLIAAS GETLRVLVDD LLDVAKAEAG QLIPQLAPVD LALLLAQIES VVQPSAPSPE VAVLFPDPAG LPTLVTDEMM LTRVLRNLIS NSLKFTSSGH VRLSVRCLEE PPGTVEFTVE DTGIGIPPQE QTKVFEEFHQ VRGAHQRGKA GTGLGLPYAR SLVILLGGTI SLASEVGHGT TVTVTLPGSP AQEPDEQARL PLIASADDDP AFAAVFRPVL EAVAERVVQV PGGVELLEFV MREKPAAIIM DLNMPDVDGY ETIRRLADSE ETAAVPVVVV TGYPLTHVDR ARLGHARAVL NKDAVDAQEL RRALGSRFEE GTA
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