| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2780 |
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| Symbol | |
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| ID | 8334129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3189659 |
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| End bp | 3192007 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644955928 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_003113534 |
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| Protein GI | 256391970 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3903] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.223521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCACG ACGACCTGGC CGGGAGCCTG CGGAAGATCA AGGCGGAGTC GGGTCGCAGT
CTGCGTGCGG TCGAGCAGGC CATCCACGTC AGCAACTCCT CGTTGTCGCG GTACCTGGCC
GGTCAGGCGA CGCCGTCGTG GAACGTCGTG GTGGCGTTCT GCCGGTTCAC CGGGCACGAC
CCCCGTCCGC TGCGGCCGCT GTGGGAGGCC GCCGAGCGGG AGCGGCGGGC ACCCGGCCGG
CCTTTCGCCG CCGACAGGCC GGCGGCGGCG AGCCGCGTGC CGCGCAACGA CCTGCCGCGG
GACGTCGCCG GGTTCACCGC CCGGCGGGCC GAGGTCGAGA CCGTGTCCCG GCTGGCGAGG
GCCGGACAGG CGGTGGCGAT CGACGGTATG GGCGGCGTCG GCAAGACCGC GCTGGCGGTC
AAGGTCGCGC ACCTGCTGAC GCCCGAATTC CCCGACTGCC AGTTGTATGT GGACCTGCAC
GGTTTCACGC CCGGCCGGGA CCCGGTCGAG CCGACGGAGG CACTGCTCGG ATTGTTGCGG
GCGCTCGGGG TTCCGGGCGG GCGCATCCCC GACGATCTGG CGGGCCGGTC CGCGCAGTGG
CGCTCCGAAC TGGCCCGGCA GCGCGCGATC GTCATCCTCG ACAACGCCGC GGACGCCGAC
CACGTCCGGG CCCTGTTGCC GGGTGCGGGC CGGAACACCG TGCTGATCAC CAGCCGGGTC
CGGATGGTCG GGTTGGACGG TGTCCAGCCG CTGTCCCTGG CCCCGCTGGG TCCGGCCGAC
GCGGCCGATC TGTTCACCGT CGCGCTGGGA CCCGGCACGG CTGCCGACCC GGAGACGGTG
GCCGAGCTGA TGCGGCGGTA CGGCGGTTTG CCGCTGTCCA TCCGGGTGGC CGCCGCGCGG
CTGCGCCACC GGCCGGCGTG GTCGGTCGCC GACCTGCTGG AGAGCCCGCC GCCGTCCGAC
GAGGCGGGGC TGGGGAAGGT CATCGACGCT TCCCTGGCCC GGCTGGGCGG CGACCAGCGC
CAGATGTTCC TGCTGCTCGG CCTGTACCCC GGAACGCTGA TCGGCCCGTT CGCCGCCGCG
GCGCTGGCCG GACGGCCGGT GACCGAGGCC CGGGCTTTGC TGGACGATCT GGTGGACGCG
AACCTGCTGG AAGAACCAGC CGCCCAGCGC TACCGCTTCC ACGACCTGAT CCGGCAGCGG
GCCGCCGAGG CCGCCCGGCG CGAGGAGTCG GCCGAGGGCC GGGACACCGC GCTGGACAGG
TTGACCGATT TCTACCTGCA CACGGTGACC TGCGGAGTGC GGGCCTTGGA CGTCGTCCCC
GAGCACGTCT TGCCGGTACG TCACGTTCCG GCCGAGGTCC CCGACATCAG CACCCCGGAA
CAGGCCATGT CCTGGTATCG CGACGAGGAA GCCACCCTCG TGCGGGTCGT CGAGCAGACC
GTGCGCCGAG GCCGCGACGA CCTCACCGCC CAGTTCGCGC TGCTGATCGG GGACCTGCTG
GGCCGCTATG GCCGATGGGA GCTGTGGCGC TGGATCGCCG ACATCGGGGT CCAGGCCGCC
GAGCGTCTGG GGAACCTCTC GATTCAGGCC GCGCTCGAAT ACAGCCGGGG GCTCGCCGCC
TACTTCACGG GTCGGCTGGA CTCTGCCGCG GCGGACTTCG CAGCCGCTGC CGACATCGCG
GCCCGGTCCG GCGCCGTCGG GATGCGGATC ATCGCGATCC GCGGAGTGGC CGCCGTCGCC
GAGGACCGCG GTGAGTTCAC GCGGGCCCTG GACTTGCTCG CGGAGGCTCG TCAGCTGCCG
CTGGCCGACC GGTATCCGAC CGAGGTCGCC ATCGCTGCTG TGCTCACAGC CCACCACTCC
CTTCTCGCGC TGGGGCGCGT CGCGGAGGCC GCTGATGTCG CCCGGGACGT GCTGGCCACG
GCCCAGGACC CGACGCCGCG CATCACGAGC CTGCGGGTAC TGGGCCGTGC CCGCCTGTCC
GATGGAGACC TACCGGGAGC GGTGACGTAC TTCCAGGAAG CCGAGGCGGC GTGCCGAGAC
AACCAAGACG CCTCATTCGC GGCCATCTGC CAAGGCGATG TCGCAGAAGC ACTGAGCCGG
CTCGGCCGCC ATGCCGAAGC TCTGGACCGG CATGAGGCGG CATTGGCCTG GGCCACCGAT
TTCGGCGACG TCTATCGGGA GATCTACCTG CGCGAAGCCT TCGCCCGCAG CTGTCTGGCG
GCCGGCGACC CGGACCGTGC CGTGGACCAG TTCCGGCAGG CGCTCGCACT GGCCGAACCG
CGCGGCTACC GGCACGTCGC GGGCTTGGCT CGGGACGGAC TCGCCCGGGC CCTGGCACCG
GTCGGATGA
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| Protein sequence | MSHDDLAGSL RKIKAESGRS LRAVEQAIHV SNSSLSRYLA GQATPSWNVV VAFCRFTGHD
PRPLRPLWEA AERERRAPGR PFAADRPAAA SRVPRNDLPR DVAGFTARRA EVETVSRLAR
AGQAVAIDGM GGVGKTALAV KVAHLLTPEF PDCQLYVDLH GFTPGRDPVE PTEALLGLLR
ALGVPGGRIP DDLAGRSAQW RSELARQRAI VILDNAADAD HVRALLPGAG RNTVLITSRV
RMVGLDGVQP LSLAPLGPAD AADLFTVALG PGTAADPETV AELMRRYGGL PLSIRVAAAR
LRHRPAWSVA DLLESPPPSD EAGLGKVIDA SLARLGGDQR QMFLLLGLYP GTLIGPFAAA
ALAGRPVTEA RALLDDLVDA NLLEEPAAQR YRFHDLIRQR AAEAARREES AEGRDTALDR
LTDFYLHTVT CGVRALDVVP EHVLPVRHVP AEVPDISTPE QAMSWYRDEE ATLVRVVEQT
VRRGRDDLTA QFALLIGDLL GRYGRWELWR WIADIGVQAA ERLGNLSIQA ALEYSRGLAA
YFTGRLDSAA ADFAAAADIA ARSGAVGMRI IAIRGVAAVA EDRGEFTRAL DLLAEARQLP
LADRYPTEVA IAAVLTAHHS LLALGRVAEA ADVARDVLAT AQDPTPRITS LRVLGRARLS
DGDLPGAVTY FQEAEAACRD NQDASFAAIC QGDVAEALSR LGRHAEALDR HEAALAWATD
FGDVYREIYL REAFARSCLA AGDPDRAVDQ FRQALALAEP RGYRHVAGLA RDGLARALAP
VG
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