| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2778 |
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| Symbol | |
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| ID | 8334127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3188093 |
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| End bp | 3188851 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644955926 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003113532 |
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| Protein GI | 256391968 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCACAC TCACAGGTAA GACGGCACTG GTCACCGGCG CGAGCCGGGG CATCGGGCAG
GGCATCGCCC TTCGGCTGGC GGCGGACGGC GCGCGCGTCG CCGTCCACTA CAACGCCAAT
GAGGACGCTG CGAAGCAAAC CGTCGCCACG ATCGAGGCGG CCGGCGCCGA AGCCTTCGCC
ATCCAGGCCG AACTCGGCAT ACCCGGCGAC GCCCGCACCC TGTGGGCAGC CTTCGACGCC
CGCGCGGAGG GCGTCGACAT CATCGTCAAC AACGCGGCCG TGCCCGGACC CTACGGACAC
CTCGGCGCCA TCGACCCCGA CGAGTTCGAC AAGGTCTTCG CGGTCAACGC CAAGGCGCCG
TTCTTCGTCA CCCAGGAGGG CCTGACCCGC CTGCGGGACG GAGGACGGGT CATCAACATC
TCCACCGGCC TGACCCGCAC GGCGGCGATG TCCGAACTCA TCGCCTACGC GATGTCCAAA
GGAGCGATCG ACGTCTTCAC CGTCAACCTC GCCAAGGATC TCGGCACGCG CGGCATCACC
GTCAACACGA TCGCGCCGGG CGTCGTCGAC ACCGACGTCA ACGCGACCTG GCTCCGCGGC
AACGACCAAG CTCTCGCAGC GACCGCAGCC CTATCGCCCC TGAACCGCGT CGCCGATCCC
GCCGAGATCG CTGACATCGC CGCGTTCCTG GCCTCCGACG ACAGCCGGTG GGTAACCGGG
CAGTGGATCG ATGCGACCGG CGGGGCGCTC ATCATCTGA
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| Protein sequence | MGTLTGKTAL VTGASRGIGQ GIALRLAADG ARVAVHYNAN EDAAKQTVAT IEAAGAEAFA
IQAELGIPGD ARTLWAAFDA RAEGVDIIVN NAAVPGPYGH LGAIDPDEFD KVFAVNAKAP
FFVTQEGLTR LRDGGRVINI STGLTRTAAM SELIAYAMSK GAIDVFTVNL AKDLGTRGIT
VNTIAPGVVD TDVNATWLRG NDQALAATAA LSPLNRVADP AEIADIAAFL ASDDSRWVTG
QWIDATGGAL II
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