Gene Caci_2765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2765 
Symbol 
ID8334114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3174286 
End bp3175170 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content74% 
IMG OID644955913 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003113519 
Protein GI256391955 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATCC TGCGAAAGAC GTGGCAGTTC CGTTCGGCGC GGATCGCGGT CGCGGTCATC 
GCCCTGATCG CGGTCCTGGC GGTCTTCGGC CGGGCGCTGG CTCCGCACGA CCCGCTGGCG
CAGAACCCGG CCGCGGCGCT GCGCGGTCCG GGCGCCGGGC ACTGGCTGGG CACCGACTAC
CTCGGCCGCG ACGTGCTGTC CCGGCTGATG GCCGGGACCG GCGCCTCGGT GGTCGGGGCG
CTGGAGGCGG TGGCCATCGG GCTGGCCGCC GGGGTCCTGC CCGGTCTGGC CTCGGTGTGG
CTCGGACCGG CCTTCGAGTG GGTCTCGGCG CGGATCGTCG ACGCCTTGCT GACGCTGCCG
TACGTGGTGT TCGCGGTCGC GGTCACCGGC GTGCTGGGCA ACGGCCTGAC CGTGGCCATG
GCCGCGATCG GCATGCTCCT GGCGCCCCGG TTCTTCCGGA TCACCCGGGC GGCGGCGCTG
AGCCAGGCGG GCTCGCAGTA CGTCGAGGCG GCCGAGCTCG CCGGCGCCTC GCGCTGGTGG
ATCCTGCGGC GGCACATCTG GGGCAAGATC AGCCCGACGA TCGCCGTGAC CACCGCGCAG
GCCTTGGCCG CCGCGCTGTT GACGGTCTCC TCGCTGGCCT TCCTGGGCCT GGGCGTCGAG
CCGCCGCTGC CGACCTGGGG CGAGATCCTC AGCAGCGATC TGACCTACCT GTCGGTGCAG
CCGTGGGCGC CGCTGGTCCC GGGTCTGCTC ATCATGGCCG CCGCCGCAGC GCTGAACGCC
CTGGCCGACG CGGTCCGGGA CGGCTCGGCG GCCGTCGACC TCCCGCGTCC CCCAGCGGCC
GTACCGGAAA AGGAGCACGC CGATGTCAGC CTCGCAGCTG TCTGA
 
Protein sequence
MRILRKTWQF RSARIAVAVI ALIAVLAVFG RALAPHDPLA QNPAAALRGP GAGHWLGTDY 
LGRDVLSRLM AGTGASVVGA LEAVAIGLAA GVLPGLASVW LGPAFEWVSA RIVDALLTLP
YVVFAVAVTG VLGNGLTVAM AAIGMLLAPR FFRITRAAAL SQAGSQYVEA AELAGASRWW
ILRRHIWGKI SPTIAVTTAQ ALAAALLTVS SLAFLGLGVE PPLPTWGEIL SSDLTYLSVQ
PWAPLVPGLL IMAAAAALNA LADAVRDGSA AVDLPRPPAA VPEKEHADVS LAAV