Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2763 |
Symbol | |
ID | 8334112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3171564 |
End bp | 3173120 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644955911 |
Product | extracellular solute-binding protein family 5 |
Protein accession | YP_003113517 |
Protein GI | 256391953 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGCCT TCCCGTCCTC GCTCGTGAAA CCGGGCCGCC GCCTGGCCGC CGCCGCGGTC GTCCTGTCCC TGGCCGCCTG CGGCGGCACC GCCACCGCCG GCAGCACGGC CGAGCAGTCC GGCGGCGGCG CGGCCACGGC CTCCGGCACG CTGAAGTGGG GCTGGGCCCT GCCGACCTCG TGGGACCCGG TGACCTCCTC CGCGGGCTGG GACGTCCACG CCCTTTCGCT GGTCTACGCC GGCCTCACTC AGGAGGACGC CGCGGGCAAC GCCGTCCCGG CGCTGGCGAG TTCCTGGAAA TACAACACCG CCGGAACCGA GATCACCTTC ACGCTGCGGC CGAACCTGAC GTTCAGCGAC GGGACGCCGC TGGACGCCAC CGCCGTGAAG GCGAACATCG AGCGTGGCCG CGACGAGAAG GACTCGCTGA TCGCCTCGCA GCTGACGAGC GTCAAGCAGG TGAGCGCGCC GAGTCCGGAC ACGGTGGTGG TCGACCTGGC CCAGCCGAAC TTCCAGATCC CGACCCTGTT CGCCGGCAAG ACCGGCATGC TCGTCAGCCC GGCCGCGTTC ACCGGCAACC GGGCGGGACT GGCGCTCAAA CCGGTGGGAG CAGGGCCTTT CACGCTCTCT TCCTACGTCC AGAACTCCAA AGCCTCGCTG GTCCGCAACC CCAAATTCTG GAACGCCTCG CAGATCCACA TAGCGAACTT CGAGCTCTAC CCGCTCCCCG ACCCCTCCAC CGCCGTGGCC GGTCTGACCT CCGGGCAGTA CAGCGTCGCG CAGATCCCCG GGAACCTGGT GGCCGCGGCC AAGTCCGCCG GGCTCAAGGT GCAGGTGATC CCGTCGCTGG TGGTGTCGGT CCTGGACGTC AACAACACGA TCGCGCCGTT CGACGATCCG AACGTCGACC AGGCGCTGAA GTACGCGGTG GACCGCAAGG CGCTGTTGCA GACCGCGAAC TTCGGCGTCG GCGACGTCTC CTATCAGCCG TTCCCGAAGG GTTACGTGGG ATACAGCGAT GCGGTCGGCG AGCCCTACGC GTACAACCCG GATAAAGCAA AGACACTTCT GGCAGCGTCC AAGTACGGCG CCCATCCGGC CGTCACCATC ACCACCAGCA CGGCAGCGGG GGTTCCCGAG CAGCTTCAGG CTCAGCTGCA AGCGGTGGGC TTCACCGTCA AGATCGAGGT GATCCCGGCT GCGCAGTTCA CGCAGATCGT CTACGTCCAG CACTCCCGCG CTCTGACCGT CGACGCCTTT GCCGGCCGTG ACTCCACGGC CCAGGCGTTC CAGGTGTTGT TCGGCAAGGC GGGGCTGCTC AACCCCGGAC GCGGTGTCAG CCCCGATCTC CAGGCGGCGG TCGACAAGAT CAGCACCACG CCGCTGGACA GCCCGGACTA CCCGGCGGTG GTTCAGGCGG CGACCGCGCT GGCGGTGCAG CAGGAGCCGA ACGTGTTCCT CTACACCGTG CCGCGCATCC TGGCGCACTC CTCCTCGGTC TCCGACCTTC CGGCCGACAC CGTGGTGCAG CGCTTCGAAG GGGTGACGGC CAAGTGA
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Protein sequence | MPAFPSSLVK PGRRLAAAAV VLSLAACGGT ATAGSTAEQS GGGAATASGT LKWGWALPTS WDPVTSSAGW DVHALSLVYA GLTQEDAAGN AVPALASSWK YNTAGTEITF TLRPNLTFSD GTPLDATAVK ANIERGRDEK DSLIASQLTS VKQVSAPSPD TVVVDLAQPN FQIPTLFAGK TGMLVSPAAF TGNRAGLALK PVGAGPFTLS SYVQNSKASL VRNPKFWNAS QIHIANFELY PLPDPSTAVA GLTSGQYSVA QIPGNLVAAA KSAGLKVQVI PSLVVSVLDV NNTIAPFDDP NVDQALKYAV DRKALLQTAN FGVGDVSYQP FPKGYVGYSD AVGEPYAYNP DKAKTLLAAS KYGAHPAVTI TTSTAAGVPE QLQAQLQAVG FTVKIEVIPA AQFTQIVYVQ HSRALTVDAF AGRDSTAQAF QVLFGKAGLL NPGRGVSPDL QAAVDKISTT PLDSPDYPAV VQAATALAVQ QEPNVFLYTV PRILAHSSSV SDLPADTVVQ RFEGVTAK
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