Gene Caci_2763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2763 
Symbol 
ID8334112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3171564 
End bp3173120 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content69% 
IMG OID644955911 
Productextracellular solute-binding protein family 5 
Protein accessionYP_003113517 
Protein GI256391953 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCT TCCCGTCCTC GCTCGTGAAA CCGGGCCGCC GCCTGGCCGC CGCCGCGGTC 
GTCCTGTCCC TGGCCGCCTG CGGCGGCACC GCCACCGCCG GCAGCACGGC CGAGCAGTCC
GGCGGCGGCG CGGCCACGGC CTCCGGCACG CTGAAGTGGG GCTGGGCCCT GCCGACCTCG
TGGGACCCGG TGACCTCCTC CGCGGGCTGG GACGTCCACG CCCTTTCGCT GGTCTACGCC
GGCCTCACTC AGGAGGACGC CGCGGGCAAC GCCGTCCCGG CGCTGGCGAG TTCCTGGAAA
TACAACACCG CCGGAACCGA GATCACCTTC ACGCTGCGGC CGAACCTGAC GTTCAGCGAC
GGGACGCCGC TGGACGCCAC CGCCGTGAAG GCGAACATCG AGCGTGGCCG CGACGAGAAG
GACTCGCTGA TCGCCTCGCA GCTGACGAGC GTCAAGCAGG TGAGCGCGCC GAGTCCGGAC
ACGGTGGTGG TCGACCTGGC CCAGCCGAAC TTCCAGATCC CGACCCTGTT CGCCGGCAAG
ACCGGCATGC TCGTCAGCCC GGCCGCGTTC ACCGGCAACC GGGCGGGACT GGCGCTCAAA
CCGGTGGGAG CAGGGCCTTT CACGCTCTCT TCCTACGTCC AGAACTCCAA AGCCTCGCTG
GTCCGCAACC CCAAATTCTG GAACGCCTCG CAGATCCACA TAGCGAACTT CGAGCTCTAC
CCGCTCCCCG ACCCCTCCAC CGCCGTGGCC GGTCTGACCT CCGGGCAGTA CAGCGTCGCG
CAGATCCCCG GGAACCTGGT GGCCGCGGCC AAGTCCGCCG GGCTCAAGGT GCAGGTGATC
CCGTCGCTGG TGGTGTCGGT CCTGGACGTC AACAACACGA TCGCGCCGTT CGACGATCCG
AACGTCGACC AGGCGCTGAA GTACGCGGTG GACCGCAAGG CGCTGTTGCA GACCGCGAAC
TTCGGCGTCG GCGACGTCTC CTATCAGCCG TTCCCGAAGG GTTACGTGGG ATACAGCGAT
GCGGTCGGCG AGCCCTACGC GTACAACCCG GATAAAGCAA AGACACTTCT GGCAGCGTCC
AAGTACGGCG CCCATCCGGC CGTCACCATC ACCACCAGCA CGGCAGCGGG GGTTCCCGAG
CAGCTTCAGG CTCAGCTGCA AGCGGTGGGC TTCACCGTCA AGATCGAGGT GATCCCGGCT
GCGCAGTTCA CGCAGATCGT CTACGTCCAG CACTCCCGCG CTCTGACCGT CGACGCCTTT
GCCGGCCGTG ACTCCACGGC CCAGGCGTTC CAGGTGTTGT TCGGCAAGGC GGGGCTGCTC
AACCCCGGAC GCGGTGTCAG CCCCGATCTC CAGGCGGCGG TCGACAAGAT CAGCACCACG
CCGCTGGACA GCCCGGACTA CCCGGCGGTG GTTCAGGCGG CGACCGCGCT GGCGGTGCAG
CAGGAGCCGA ACGTGTTCCT CTACACCGTG CCGCGCATCC TGGCGCACTC CTCCTCGGTC
TCCGACCTTC CGGCCGACAC CGTGGTGCAG CGCTTCGAAG GGGTGACGGC CAAGTGA
 
Protein sequence
MPAFPSSLVK PGRRLAAAAV VLSLAACGGT ATAGSTAEQS GGGAATASGT LKWGWALPTS 
WDPVTSSAGW DVHALSLVYA GLTQEDAAGN AVPALASSWK YNTAGTEITF TLRPNLTFSD
GTPLDATAVK ANIERGRDEK DSLIASQLTS VKQVSAPSPD TVVVDLAQPN FQIPTLFAGK
TGMLVSPAAF TGNRAGLALK PVGAGPFTLS SYVQNSKASL VRNPKFWNAS QIHIANFELY
PLPDPSTAVA GLTSGQYSVA QIPGNLVAAA KSAGLKVQVI PSLVVSVLDV NNTIAPFDDP
NVDQALKYAV DRKALLQTAN FGVGDVSYQP FPKGYVGYSD AVGEPYAYNP DKAKTLLAAS
KYGAHPAVTI TTSTAAGVPE QLQAQLQAVG FTVKIEVIPA AQFTQIVYVQ HSRALTVDAF
AGRDSTAQAF QVLFGKAGLL NPGRGVSPDL QAAVDKISTT PLDSPDYPAV VQAATALAVQ
QEPNVFLYTV PRILAHSSSV SDLPADTVVQ RFEGVTAK