Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2757 |
Symbol | |
ID | 8334106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3167054 |
End bp | 3167593 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644955905 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003113511 |
Protein GI | 256391947 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.331612 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGATCCG ACGCGCGCCG CAACCGCGAG CTGATCCTCA GCGCCGCCGT CGACCTGTTC ACCGAATACG GCCCGGCGGT CTCGATGGAG GAGATCGCGC GCTCAGCCGG GCTCGGCGTC GGCACGCTCT ACCGCCACTT CCCCGACCGG CAGAGCCTGC TGTACGAGAT CGCCACCGAC AGCCTGCACC GCCTCCACCA GCACGCCCAA GACGTGCTCG GCACCACGGC TTCCGGCTGG GAAGCCCTCG TCGACATCAT CGAGCGCTGT GTGAGCCTGC CCTTGGCCCT CACCAAGTCA CTCAGCGAGA TCCCCTTGGA CACGCCCGAA ATCGACACCC TCGCGGCCCG AAGCGACGCG CTCATCCTTC AAGCCGTCAT TCACGCGCAG AAGCAGGGCG AGCTGCGCCG AGACCTCACT CCCGCCCAGG TGCTCGAGAT GCTGAGCGTG GTCGTCTGCC GCCCCGGAAT CCGCACCGAC GATCCCCTGA TCACCGTCTT CCTCGACGGG CTGCGCGCGC AGCCGCATCG CCCAAGGTAG
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Protein sequence | MRSDARRNRE LILSAAVDLF TEYGPAVSME EIARSAGLGV GTLYRHFPDR QSLLYEIATD SLHRLHQHAQ DVLGTTASGW EALVDIIERC VSLPLALTKS LSEIPLDTPE IDTLAARSDA LILQAVIHAQ KQGELRRDLT PAQVLEMLSV VVCRPGIRTD DPLITVFLDG LRAQPHRPR
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