Gene Caci_2757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2757 
Symbol 
ID8334106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3167054 
End bp3167593 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content68% 
IMG OID644955905 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003113511 
Protein GI256391947 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.331612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGATCCG ACGCGCGCCG CAACCGCGAG CTGATCCTCA GCGCCGCCGT CGACCTGTTC 
ACCGAATACG GCCCGGCGGT CTCGATGGAG GAGATCGCGC GCTCAGCCGG GCTCGGCGTC
GGCACGCTCT ACCGCCACTT CCCCGACCGG CAGAGCCTGC TGTACGAGAT CGCCACCGAC
AGCCTGCACC GCCTCCACCA GCACGCCCAA GACGTGCTCG GCACCACGGC TTCCGGCTGG
GAAGCCCTCG TCGACATCAT CGAGCGCTGT GTGAGCCTGC CCTTGGCCCT CACCAAGTCA
CTCAGCGAGA TCCCCTTGGA CACGCCCGAA ATCGACACCC TCGCGGCCCG AAGCGACGCG
CTCATCCTTC AAGCCGTCAT TCACGCGCAG AAGCAGGGCG AGCTGCGCCG AGACCTCACT
CCCGCCCAGG TGCTCGAGAT GCTGAGCGTG GTCGTCTGCC GCCCCGGAAT CCGCACCGAC
GATCCCCTGA TCACCGTCTT CCTCGACGGG CTGCGCGCGC AGCCGCATCG CCCAAGGTAG
 
Protein sequence
MRSDARRNRE LILSAAVDLF TEYGPAVSME EIARSAGLGV GTLYRHFPDR QSLLYEIATD 
SLHRLHQHAQ DVLGTTASGW EALVDIIERC VSLPLALTKS LSEIPLDTPE IDTLAARSDA
LILQAVIHAQ KQGELRRDLT PAQVLEMLSV VVCRPGIRTD DPLITVFLDG LRAQPHRPR