Gene Caci_2755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2755 
Symbol 
ID8334104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3164744 
End bp3165562 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content71% 
IMG OID644955903 
Productprotein of unknown function DUF1684 
Protein accessionYP_003113509 
Protein GI256391945 
COG category[S] Function unknown 
COG ID[COG3358] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.699811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCC AGGACGTGGC AGCAGACGTG GACGCCTTCG CTCAGACCTG GCGGGAGTGG 
CACAGCGGCC ACGAAGACCG GCTGGCCGAC CCGCACGGCT TCCTCGCGGT CACCAGCCTG
CACTGGCTGC ACGAGGAGCC CCAACGTTTC CCCGACGCCC CCGGCGCGTG GTCCACCGGC
CCCGACGGCG TCCGGGTCGT CCTGGCCGAG GGCGAGGAAC TGATCGTCGA CGGAGCGGCT
GTGCACGGCG AGTACAGCTT CGGGGTCATC GGCGAGCGAG CCAGCCTCTT CCCCGTCTCC
GGAGACGCAG TCATCGAGGT CGCCAAGCGC GGCGGCCACG ACATCGTGCG CCCCCGCCAC
CCCGAGAACC CGCTTCGCCT GGCCTACAAC GGGACCCCGG CTTACGAGCC GGACTCGCGG
TGGGCGGTCA CCGGTCGCTA CGTGGCTTTC GACCACCCTC GTCCCACCAC CGTCGGCGCC
GCCGTCGAAG GCCTCCAGCA CGTCTACGAC GCGCCGGGCC GCGTCGAGTT CGACCTCGCC
GGACACAGCC TGAGCCTGAC CGTCTTCGAG GGGCACGCCC CAGGCAGCCT CCTGGCGCTG
TTCACCGACG CCACCTCCGG CGTGAGCACC TACGCGGCCA ACCGATCGCT GCAGATCGAT
CCGCCGGCCG CCGACGGAAC AGTGTGGTTG GACTTCAACC GCGCGGTGAA CCTGCCCTGC
GCCTACACCG ACCTGGCGAC CTGCCCGCTG CCGCCGGCAG AGAACCGGCT CCAGGTCGCC
GTCGAGACCG GCGAGAAGAT CCCGCACGAA CGCCGCTGA
 
Protein sequence
MTVQDVAADV DAFAQTWREW HSGHEDRLAD PHGFLAVTSL HWLHEEPQRF PDAPGAWSTG 
PDGVRVVLAE GEELIVDGAA VHGEYSFGVI GERASLFPVS GDAVIEVAKR GGHDIVRPRH
PENPLRLAYN GTPAYEPDSR WAVTGRYVAF DHPRPTTVGA AVEGLQHVYD APGRVEFDLA
GHSLSLTVFE GHAPGSLLAL FTDATSGVST YAANRSLQID PPAADGTVWL DFNRAVNLPC
AYTDLATCPL PPAENRLQVA VETGEKIPHE RR