| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2750 |
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| Symbol | |
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| ID | 8334099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 3160018 |
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| End bp | 3161523 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644955898 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003113504 |
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| Protein GI | 256391940 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTCC ACGACGTCCT GTCCCGCGGT ACGCCGAATC CCCTACGCAA CCAGCGCGTC
GTCATTCCGA TCATGTCCGT CTTCACCATC TTCATGGTGA TCGTCGACGG CTCGATCACC
ACGGTGGCGC TGCCGTCGCT GGCGCGTCAG TTCCACCTGT CCCCCGCCGG CCTGGACGGC
GTCGTCGTGA TCTATCCCAT CTGCCTGGGC ATGGTCATCC CCACCTCCGC CTGGCTGCTC
GAACGCCACG ACGGCCGCCG CGTGCTGCTG CTCGGCCTGG CCCTGTTCAC CCTGGCCTCC
GGGCTGTGCG GGGCTGCTGA GAACCTTCAG CAGCTGATCG TCTTCCGCGC CCTGCAGGGC
CTGGCCGCCG GGGCGTTGAT GCCCGTCTCG CAAGCGCTGA TATTCAGGAC TTTCACGCAG
CACGAACAGA TACGACTGTC CCGGATCACG ATCATCCCCC AACAACTGGC TCCGGCCATC
GCGCCGTTGC TCGGCGGCTC ACTGGTGGTG GCCTTCAGCT GGCGCTGGGT CTTCTACGCA
AACGTACCGG TCGGTCTGGC GGCCGTGGTG TTCGGGCTGC TCTTCCTCGG AGAGCACCGC
GAGCACCGCG CCGCCCGGCT GGATCTGGCC GGCCTGCTGC TCAGCGCTGC CGCGATGGGC
TCCCTGATGT ACGGGGTCTG CGCCGGCCCG GACCACGGGT GGGCCACACC GGCCGTTATC
AGTGCGCTGA TGGGCGGTGC GGCGTTGCTC GGCCTGGCCA TACGCCACCA GTTGCGCACG
GACCAGCCCG CGCTGCGGCT GCGATTGTTC GCAGACCGGC TCTTCCGCAA GGCCTGCCTG
GTCGGCCTCG TCGGACTCAT TCCCACCATG GGCACCATGT TCCTGATCCC GCTGTTCCTC
CAGCAGGCGC AGGGGCGCGA CGCCTTCGCC TCCGGCAGCG CGACCTTCAC CGAGGCCTTC
GGCGTGTTGC TGACCATGCA GGCGGTCGGC GTCCTTTATC AGCGGGTCGG CCCGGGCCCG
ATCATCGGGG GCGGGCTGCT CGGCGTGGCC GTCGTCGAGC TGCTGTTCGC GACCTGCGAC
GCCGACACCG GGCTGTGGAC GCTGCGGCTC TACATGTTCC TGCTCGGCGT CATGATGGGC
GCCTTCTTCA TCCCGGTCAC CCTGGCCTCA CTCACGACGC TCGACCGTGC CGACTCCGCC
CAGGCTGCGA CCCTGGGCAC GGTCGTGCGG CAGTTCGGGA TGGCGCTGGC GCCGACCGTC
GTCACCACCG TTCTCGTCCT CGACTCCGGC CACGGCGGCC ACGCCGATAT CTCGACGCCG
GTGGCGGGAT ACCAGAAGGC GTTTCTCGTC CTCGCCGCGA TCGCGCTGTT CACCGGGCTT
TACGCGTTCA GCTTGGGTCG CCAGCGTCGG ATGCCGGAGG CGGAGTCCAC CGGCACGGCG
AATGTGCACG CCGCGGGCGC GGCGCAAGGA GTCCGTCAGG CCCTCACTGC CCGAACACCC
GAATGA
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| Protein sequence | MSVHDVLSRG TPNPLRNQRV VIPIMSVFTI FMVIVDGSIT TVALPSLARQ FHLSPAGLDG
VVVIYPICLG MVIPTSAWLL ERHDGRRVLL LGLALFTLAS GLCGAAENLQ QLIVFRALQG
LAAGALMPVS QALIFRTFTQ HEQIRLSRIT IIPQQLAPAI APLLGGSLVV AFSWRWVFYA
NVPVGLAAVV FGLLFLGEHR EHRAARLDLA GLLLSAAAMG SLMYGVCAGP DHGWATPAVI
SALMGGAALL GLAIRHQLRT DQPALRLRLF ADRLFRKACL VGLVGLIPTM GTMFLIPLFL
QQAQGRDAFA SGSATFTEAF GVLLTMQAVG VLYQRVGPGP IIGGGLLGVA VVELLFATCD
ADTGLWTLRL YMFLLGVMMG AFFIPVTLAS LTTLDRADSA QAATLGTVVR QFGMALAPTV
VTTVLVLDSG HGGHADISTP VAGYQKAFLV LAAIALFTGL YAFSLGRQRR MPEAESTGTA
NVHAAGAAQG VRQALTARTP E
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