Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2738 |
Symbol | |
ID | 8334087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3139702 |
End bp | 3141108 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644955887 |
Product | Ricin B lectin |
Protein accession | YP_003113493 |
Protein GI | 256391929 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.16823 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.176429 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATCAG ACATGACGCC CGAGCCTGAG GGCACCGTGG CGAAGGCCGG CTGGGCGCGA TCCCAGCCGA GGCCGGCGAC GAGGGCCGTG ATGGCGGTGG CGGCGGTGCT GGCGCTCCTC GCGGGGTTGC TCGCGATCGG GCAGGCCTCG GCCCGATCCG CGCCGTCCGC CGCGTCGCCG GCCACCACCC AGCGCGGCCC GGACCCGACC GTCGGCATGA TCGAGGCCAC GCGCGGACCG TTCGCCACGG CGCAGGTCGC GATGCCCACC GGGCACGGTT TCGGCGGCGG GATGATCTAC TACCCGACCG ACACCAGCCA GGGCACGTGG GGCGTGTTGG CGATCGTGCC GGGTTACTCG GCGCTGTTCG CCGACGAAGA GGCCTGGATG GGCCCGTGGC TGTCGTCCTT CGGCTTCGTC GTGGTCGGGG TCGAGACCAA CACCCGCACC GACAGCGACT CCCAGCGCGC CGCCGACCTG TTGGCGGCAC TGGACTACCT GACGACCCAG AGCCCGGTGC GCACCCAGGT CGATCCGGCC CGGATGGCGG TGCTGGGCCA CTCCGCCGGC GGCGCCGGAG CCATCGAAGC CGCCGAACAG CGCCCCTCTC TCAGGGCCCT GATCGGCCTG GCGCCCGGAT TCCCCGGCCA GGGACTGAGC ATGGCCGCCG ACACCGTCCC GGCACTGATC ATCGGCGGCC AGAACGACGG GACCGTCACG CCGTCCTACC TCTCCAGCCT GTACGGCACA CTGCCGGCCT CGACACAGAG CGCCTTCGCC CAGATCGCCG GCGCCGACCA CGTCTACTAC ACGCACCCGA ACAACGTCGA GATGAAGCTG ATCATCCCGT GGCTGAAGGT CTTCGTGGAC AGCGACACCC GCTACACGCA GTTCCTGTGC CCCTCGCTCC CCGACCCGAG CACGATCTCG GCCTACCAAC CGAAGTGCCC GTACATCCCG CCGGGCGGCT CGTCATCGCC GAGCTCGTCC TCCTCGTCGA GCTCCGCGCC CCCGCCGAAC TCCGCGCCGC TGCACGCGGT GGGCGCCGCC AAGTGTCTCG ACGTGCCGAA CTCCAGCACC ACCGCCGGCA CGCAGCTGCA GATCTACACC TGCTCCAACG GCGCCAACCA GCTGATCACC CACACCGGCT CGAACCAGCT CACCGTCTAC TCCAGCACCA TGTGCCTGGA CGCCAACAAC AAGGGAACCA CCAACGGCAC CAAGGTGATC ATCTGGCCCT GCAACGGCCA GTCGAACCAG CAGTGGAACC TGAACCCCAA CGGCACCATC ACCAGCGCCG CATCAGGACT CTGTCTCGAC GTGACCGGAG CCTCCACGGC CAACGGCGCA CTGGTCCAGC TGTGGACCTG CAACGGCGGA TCCAACCAAC AATGGCACCT CGGATGA
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Protein sequence | MRSDMTPEPE GTVAKAGWAR SQPRPATRAV MAVAAVLALL AGLLAIGQAS ARSAPSAASP ATTQRGPDPT VGMIEATRGP FATAQVAMPT GHGFGGGMIY YPTDTSQGTW GVLAIVPGYS ALFADEEAWM GPWLSSFGFV VVGVETNTRT DSDSQRAADL LAALDYLTTQ SPVRTQVDPA RMAVLGHSAG GAGAIEAAEQ RPSLRALIGL APGFPGQGLS MAADTVPALI IGGQNDGTVT PSYLSSLYGT LPASTQSAFA QIAGADHVYY THPNNVEMKL IIPWLKVFVD SDTRYTQFLC PSLPDPSTIS AYQPKCPYIP PGGSSSPSSS SSSSSAPPPN SAPLHAVGAA KCLDVPNSST TAGTQLQIYT CSNGANQLIT HTGSNQLTVY SSTMCLDANN KGTTNGTKVI IWPCNGQSNQ QWNLNPNGTI TSAASGLCLD VTGASTANGA LVQLWTCNGG SNQQWHLG
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