Gene Caci_2727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2727 
Symbol 
ID8334076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3124125 
End bp3124919 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content72% 
IMG OID644955877 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003113483 
Protein GI256391919 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG AGAACGTCGA CGAGACAGCG GCCACCCGCT CGATCTGGGA GCGGATGGCC 
CTGTCCCCGC CGGTCCACCG CCCGGTGCTG ACCCACGCCC TGATCGCCGA GGCGGCGCTG
CGGATCGCCG ACGCCGACGG CCTCGAGGCG GTGTCGATGC GAAGGCTCGC CACCGAGCTC
GGGGTGTCGT CGATGACCTG CTACCGCTAC GTCTCAGGCA AGGACGACGT CATAGAGCTG
ATGCTCGACA CGGTCCGCGG CGGCATGCTC CTCGATGAGG ACGAACTCGC CGAACCGGGC
GAACCCGGCG AGTCGGCCGG GCGGGCTGAG CCTGCCGGCT CCAGCCACTG GCGGCGCGTC
CTGCGGGCCT CGGCGATGCG CTTCCGCGGC GTCATCCTGA TGCACCCTTG GATGACCGAC
CTGCCCGGCC GCATCCTGTT CGCCCCGACC CCGGCCTTCC TCGCCGTCGC CGAACAGAAC
CTCGCCGCCT TCGACGGCCT CGGCCTGACC GCGGCCCAGA TCACCGACAT CACCGGCGCG
GTCACCGCCT ACACCCGCGC CGGCACCCAC GACGAGGTCA CCCGCGAACG GCTGCGCGCC
CCCGAGGGCT GGACCTCACC GCGGGACGCC AAGGACGCGA ACACCGACCG CCTGGCCTGG
CTGCTCGCGA ACGGCGACTA CCCCCGCTAC GAGCGCTCCC TGCACGAGGG CGCCCCCCGC
CACGACGAGC AGGCCCGCTT CGAATTCGGC CTCGACTGCC TCCTCGACGG CATCGCAGCG
CGCCTCTCGC GCTGA
 
Protein sequence
MSTENVDETA ATRSIWERMA LSPPVHRPVL THALIAEAAL RIADADGLEA VSMRRLATEL 
GVSSMTCYRY VSGKDDVIEL MLDTVRGGML LDEDELAEPG EPGESAGRAE PAGSSHWRRV
LRASAMRFRG VILMHPWMTD LPGRILFAPT PAFLAVAEQN LAAFDGLGLT AAQITDITGA
VTAYTRAGTH DEVTRERLRA PEGWTSPRDA KDANTDRLAW LLANGDYPRY ERSLHEGAPR
HDEQARFEFG LDCLLDGIAA RLSR