Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2727 |
Symbol | |
ID | 8334076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 3124125 |
End bp | 3124919 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644955877 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003113483 |
Protein GI | 256391919 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCG AGAACGTCGA CGAGACAGCG GCCACCCGCT CGATCTGGGA GCGGATGGCC CTGTCCCCGC CGGTCCACCG CCCGGTGCTG ACCCACGCCC TGATCGCCGA GGCGGCGCTG CGGATCGCCG ACGCCGACGG CCTCGAGGCG GTGTCGATGC GAAGGCTCGC CACCGAGCTC GGGGTGTCGT CGATGACCTG CTACCGCTAC GTCTCAGGCA AGGACGACGT CATAGAGCTG ATGCTCGACA CGGTCCGCGG CGGCATGCTC CTCGATGAGG ACGAACTCGC CGAACCGGGC GAACCCGGCG AGTCGGCCGG GCGGGCTGAG CCTGCCGGCT CCAGCCACTG GCGGCGCGTC CTGCGGGCCT CGGCGATGCG CTTCCGCGGC GTCATCCTGA TGCACCCTTG GATGACCGAC CTGCCCGGCC GCATCCTGTT CGCCCCGACC CCGGCCTTCC TCGCCGTCGC CGAACAGAAC CTCGCCGCCT TCGACGGCCT CGGCCTGACC GCGGCCCAGA TCACCGACAT CACCGGCGCG GTCACCGCCT ACACCCGCGC CGGCACCCAC GACGAGGTCA CCCGCGAACG GCTGCGCGCC CCCGAGGGCT GGACCTCACC GCGGGACGCC AAGGACGCGA ACACCGACCG CCTGGCCTGG CTGCTCGCGA ACGGCGACTA CCCCCGCTAC GAGCGCTCCC TGCACGAGGG CGCCCCCCGC CACGACGAGC AGGCCCGCTT CGAATTCGGC CTCGACTGCC TCCTCGACGG CATCGCAGCG CGCCTCTCGC GCTGA
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Protein sequence | MSTENVDETA ATRSIWERMA LSPPVHRPVL THALIAEAAL RIADADGLEA VSMRRLATEL GVSSMTCYRY VSGKDDVIEL MLDTVRGGML LDEDELAEPG EPGESAGRAE PAGSSHWRRV LRASAMRFRG VILMHPWMTD LPGRILFAPT PAFLAVAEQN LAAFDGLGLT AAQITDITGA VTAYTRAGTH DEVTRERLRA PEGWTSPRDA KDANTDRLAW LLANGDYPRY ERSLHEGAPR HDEQARFEFG LDCLLDGIAA RLSR
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