| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2714 |
|---|
| Symbol | |
|---|
| ID | 8334063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 3108359 |
|---|
| End bp | 3109678 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644955864 |
|---|
| Product | sodium/hydrogen exchanger |
|---|
| Protein accession | YP_003113470 |
|---|
| Protein GI | 256391906 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTTCG CGGTCGCGCC GGACGCGGTT CTTGCCGGAG AGGTCGCGGT GGCGATCGTC
GCGGCCTGGG CGGCGCGCAC GGCCGCCCGG CCGCTGCGCC AGTCGGCGGT CGTCGTGGAG
ATCCTGGCCG GAGTCGCCCT CGGGCCGAGC CTGCTCGGCC TGCTGCCGGG CGACCCCACC
GGCCGGCTGT TCCCGGCGTC CGGCCGCGGC ACCCTGACCT CCGTGGCCGA GCTGGGCCTG
CTGCTGTTCA TGTTCGCCAT CGGGTGGGAG CTGGACGTCT CGGTCGTGCG GGCGCGGCGC
ACGGCGACGA TCGCGATGAC GGCCGCGAAC TTCGTCGTGC CGTTCGCGGT CGGCGCCGCG
CTCGCCTTCG CGCTGTATCC GGCCTATGCC GGAACCCGGT CGGGCCACCG CGTCACGGAA
GCGGTGTTCG TGGTCTACAT CGGCGTCGCG TTGGCGATCA CCGCCTTCCC GGTCCTGGCC
CGGATCCTCG GTGACAGTCC GCTGCGGAAC ACGCCGGTCG GGCAGACCGC GATGGCGATG
GCGGCCGGCA CGGACCTGTG CGGCTGGCTC GGGCTGGCGC TCGTGGTCAT CGCGGCGTCG
GCGACCGGCT CGGCGGCATC ATGGACGACG CTCCCGCTGG TCGTTGTCTA CCTGGCGGCG
ATGTTCCTGA TCGTCCGGCC GCTGCTTCGC ACGGCGCTGG CGCACGTCCG CGCGGTCGGC
TCGGGCGGGA CGCTGCCGCT GGTCGTGGCC GCGGTGCTGG CATCGTCGTA CGTGTCCTCG
GCGGCGGGAT TGCACGCCGC CTTCGGGGCG TTCCTGCTCG GCCTGGTGAT GCCGCGGGAC
TCCCGCGCCG TCCTCATGCT CGACATCGCC GAGCCGCTGG AGCGCACCGG CGCGATCCTG
ATGCCGGTGT ACTTCGTCGC CACCGGCCTG AGCGCGGACT TCCACACCCT GGGCTGGGCC
GGCTTCGAGC TCGGCTTCGG CGTCGTGGCC CTGGCCTCGA CGGCGAAGAT CGGAGCAGTG
GCGGCCGCGG CCCGCATCTG CGGCACGGAC CGGCGCGAGG CGCTGATCCT CGGAGTCCTG
ATGAACACGC GCGGACTGAC CGAGATCGTC GTTCTCGACA TCGGCCTGTC GATCGGCATC
ATCGACGCCC ACCTGTTCAC CGCGCTGCTG TTGATGGCGG TGGCGACGAC CGCCGTCACC
ACCCCGGTCC TGCACCGCCT GACCTCGGCC GCGTCCCCGG CGACCCCCGC GCCGTGGCGC
CCGGGTTCAC GGCCTGACCG AGACGCGCCC TCGCCCTCCG GTCCGGCTCG AACGGCGTAG
|
|---|
| Protein sequence | MAFAVAPDAV LAGEVAVAIV AAWAARTAAR PLRQSAVVVE ILAGVALGPS LLGLLPGDPT
GRLFPASGRG TLTSVAELGL LLFMFAIGWE LDVSVVRARR TATIAMTAAN FVVPFAVGAA
LAFALYPAYA GTRSGHRVTE AVFVVYIGVA LAITAFPVLA RILGDSPLRN TPVGQTAMAM
AAGTDLCGWL GLALVVIAAS ATGSAASWTT LPLVVVYLAA MFLIVRPLLR TALAHVRAVG
SGGTLPLVVA AVLASSYVSS AAGLHAAFGA FLLGLVMPRD SRAVLMLDIA EPLERTGAIL
MPVYFVATGL SADFHTLGWA GFELGFGVVA LASTAKIGAV AAAARICGTD RREALILGVL
MNTRGLTEIV VLDIGLSIGI IDAHLFTALL LMAVATTAVT TPVLHRLTSA ASPATPAPWR
PGSRPDRDAP SPSGPARTA
|
|---|
| |