Gene Caci_2713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2713 
Symbol 
ID8334062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3107246 
End bp3108280 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content74% 
IMG OID644955863 
Producthypothetical protein 
Protein accessionYP_003113469 
Protein GI256391905 
COG category[S] Function unknown 
COG ID[COG1808] Predicted membrane protein 
TIGRFAM ID[TIGR00271] uncharacterized hydrophobic domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGA TCACCGGGGC GGATGTCGAG CGGATGACGG CGTCGCTGTT CATCGAGCCG 
GGGTGGCGCT CGCGGGGCTT GAGCAAGTTC TGGACGCTGC TGATCCTGGC CGCGCTGATC
GCCTCGGCCG GGGTGGTCGG CGACTCCACC GCCACGGTCA TCGGGGCGAT GATCGTGGCT
CCGCTGATGA CCCCGATTCT GGGCAGCGCG CTGGCGTTCG TCCTGGTCGA TCGCAGGCAT
CTGATCCGCT CGGTGCTGCT GGTGGTCGCG GGGTCCGCCT CGGTGATCGC CGTGGGGTAC
CTGGTCGGCT GGATCGGGGC GCCGCCGGAC GACTTCGCCG GCAACAGCCA GGTCGCCTCG
CGGATCAGCC CGCACCTGAT CGACCTGCTC GCCGCCCTGG CCACCGGCAC GGCCGGGGCG
TTCGCGCTGG CCCGGGCCGA CGTCTCCGAC GCGCTGCCCG GCGTGGCGAT CGCCATCTCC
CTGGTGCCGC CGCTGGCCGT GACCGGGCTG CTGCTGGAAG TCCGCCGCTT CCACGACGCC
GGCCAGGCCG CCCTGCTGTT CAGCACCAAC GTCGCCGCCA TCATCGGCAC CGGCATCACC
GTCTTCCTCA TCTTCCAAGT CCGTGCCGCG GCCCAGGCCG CCGGCCGGCG CGTGGGGCGC
CTGCGCGGCA CCAGCCTGGC GAGCGTCGCG GCACTGCTGG TACTGGTGGC CGTGCCGCTG
ACGATCGGCA CCGTGGCGGT GACCCGGGAC CGGCAACTGG CCGCGGACGC CGGCCCGGCG
GCTCGGGCCT GGGCCGCCGG GCACGGCTGG GAGGTCGAAT CGGTCACGGC CCGCGACGGC
AGGGTCGACA TCACCGTCCT GGGCCAGCCG CCCGCCCCCG ATCCCCAAGG CCTGCGCCGG
GCTCTGGACA CAGCCGGCGC CGGCGACGCA CCGCTGCTGC TGCACGTCGT GGGCGGCGCG
AGTCTGAGCT GCCCGCCGCG GACCGGGCAG TGCGCCGTCA CCACGAGCAT CGGCTCATCG
AACACATCGT CCTGA
 
Protein sequence
MPEITGADVE RMTASLFIEP GWRSRGLSKF WTLLILAALI ASAGVVGDST ATVIGAMIVA 
PLMTPILGSA LAFVLVDRRH LIRSVLLVVA GSASVIAVGY LVGWIGAPPD DFAGNSQVAS
RISPHLIDLL AALATGTAGA FALARADVSD ALPGVAIAIS LVPPLAVTGL LLEVRRFHDA
GQAALLFSTN VAAIIGTGIT VFLIFQVRAA AQAAGRRVGR LRGTSLASVA ALLVLVAVPL
TIGTVAVTRD RQLAADAGPA ARAWAAGHGW EVESVTARDG RVDITVLGQP PAPDPQGLRR
ALDTAGAGDA PLLLHVVGGA SLSCPPRTGQ CAVTTSIGSS NTSS