Gene Caci_2701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2701 
Symbol 
ID8334050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3098096 
End bp3098299 
Gene Length204 bp 
Protein Length67 aa 
Translation table11 
GC content61% 
IMG OID644955851 
Productcold-shock DNA-binding domain protein 
Protein accessionYP_003113457 
Protein GI256391893 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTG GCACCGTGAA GTGGTTCAAA GCGGAAAAGG GTTTCGGTTT CATCGAGCAG 
GACGACGGCG GACCTGACGT GTTCGCCCAC TTCTCGAACA TCAGCGCCGA AGGCTTCCGC
GAGCTGCTCG AGGGCCAGAG GGTCGAGTTC GAGATCGCGC AGAGCCCCAA GGGCCCGCAT
GCCGAGAACA TCCGCCCGAT CTGA
 
Protein sequence
MTVGTVKWFK AEKGFGFIEQ DDGGPDVFAH FSNISAEGFR ELLEGQRVEF EIAQSPKGPH 
AENIRPI