Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2680 |
Symbol | |
ID | 8334029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 3073652 |
End bp | 3075028 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644955831 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003113437 |
Protein GI | 256391873 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCT CCCAGAGAAC GCACAGATAC ACGAGGAAGC GCGAGTACAC AAGGAAGTAC AGATCCGCCT TCGTCGCCGT GGCCGCCGCC GTGGCCCTGC TCGCCGCCGC GTGCGGGAGC GGTTCGAGCA AGTCCGACGC GGGATCGTCG GGCTCCGTGA GCGGACAGAC CATCACCTAC TGGGCCAGCG ATCAGGGCAG CTCCATAGCC GACGACGTGA AGGTCTTGAC CCCCGAACTC AACGCGTTCA CCGCGCAGAC CGGGGTGAAG GTCAAACTCG AGGTGATCGG GTGGGCCGAC CTGCTGAACC GGGTCCTCGC GGCGACCACC TCCGGTCAGG GCCCTGACGT CCTGAACATC GGCAACACCT GGTCCGCCTC GCTCCAGGCC TCCGGCGCCT TCCTGCCGAT CACCCCCGCC ATCATGTCCC AGATCGGCGA CACCGGCCGA TTCCTGCCCG GCGCCCTCGC CGCGACCGGC GCGGCCGGCA AGGACCCGGT CGGCGTGCCG ATCTACTCCA CGGCGTACGG GCTCTACTAC AACAAGGCGG AGTTCGCCGC GGCCGGCATC ACCAAACCGC CGGCCACGTG GGAGGACCTG GTCGCCGACG GCAAGCTGCT GACGACCGGC AGCCAGTGGG GTCTCACGCT GGAGGCGGCC AGCCCCACGG AGAACTCCCA TCACGCGTTC GTGTTCGACG AGCAGCAGGG CGGGAACTGG TTCGACTCCT CGAACAACCC GAACTTCGTC ACGCCGCAGA ACACCGCCGC CATCGAGGAC TTCGTCAACC TCATGGGCAG CGACAAGATC GTCAACCCGA GCGACGCGGC GAACTCGAAC GGCACCGAGG CGCTCCAGGA GTTCGCCGCG GGCAAGGCCG CCATGCTGAT GTGGCAGCCC GCGGGCGCGA ACCTCCAGAA GTACGGCATG CAGCCCTCGG CGTACGGCGT CGTGCCGGTG CCGTTCCCGG CGACCACCCC GAGCGGCGGC CGGCATGTCG ACTCCATCGT CGGCGGCATC AACCTCTCGG TGTTCGCCAA CACCAAGCAC AAGGCCGCGT CGCTGGCCTT CCTGAAGTTC ATGACCAGCG CCTCGACCGA GACCGCGCTG AACAAGGCAT ACGGCTCGCT CCCGTCGGTC ACCGACGCGT ACACCGACCC GGCGTTCCAG ACCGCCGACG ACAAGGTGTT CCAGAGCGTG CTGGCCTCCT CGGCCGGTTC GATGCCGGAG ATCGCGAAGG AGAGCGAGTT CCAGACGGTC ATCGGCGCCG CGCTGAAGCA CCTGTTCGCG GACGCGGCCG GCGGGAAGCA GATCACTGAC TCGCTCGTCA ACGCCGAGCT CACCACGGCA CAGCAGACGA TGCAGGCGAG CGGCTGA
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Protein sequence | MNASQRTHRY TRKREYTRKY RSAFVAVAAA VALLAAACGS GSSKSDAGSS GSVSGQTITY WASDQGSSIA DDVKVLTPEL NAFTAQTGVK VKLEVIGWAD LLNRVLAATT SGQGPDVLNI GNTWSASLQA SGAFLPITPA IMSQIGDTGR FLPGALAATG AAGKDPVGVP IYSTAYGLYY NKAEFAAAGI TKPPATWEDL VADGKLLTTG SQWGLTLEAA SPTENSHHAF VFDEQQGGNW FDSSNNPNFV TPQNTAAIED FVNLMGSDKI VNPSDAANSN GTEALQEFAA GKAAMLMWQP AGANLQKYGM QPSAYGVVPV PFPATTPSGG RHVDSIVGGI NLSVFANTKH KAASLAFLKF MTSASTETAL NKAYGSLPSV TDAYTDPAFQ TADDKVFQSV LASSAGSMPE IAKESEFQTV IGAALKHLFA DAAGGKQITD SLVNAELTTA QQTMQASG
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