| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2671 |
|---|
| Symbol | |
|---|
| ID | 8334020 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 3059269 |
|---|
| End bp | 3060927 |
|---|
| Gene Length | 1659 bp |
|---|
| Protein Length | 552 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644955822 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003113428 |
|---|
| Protein GI | 256391864 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACGGCG CCGGGAACAC CGGCGAGCCG GCCGCCGGGG CGGGGGCGAG GCCCGTCGAG
GTGCCGGACG GCTTCGTCGT CGGCCGCTGG CGGGTCACCG GGTATCTGGG CTCGGGCAGC
TGGGGCAGCG TCTATCTCGG GGAAGCAGTC GGGGACGCGG CCGTGGACGG CGATCCGGCC
GAGGTGGCCC TGAAGTTCCT GCCGCCCTCG GTCGGCACCC CGGGGCGGCG CGCCCTGCTC
GCCGAGGTCG TGGACCGCGA GCGCCGGTTC AGCGAGAGCA TCGAGCATCC CGCGCTGATC
CGCACGGTGG CCGTGGAGAC CGCCGAGTCC GGCGACGCCG CCGTCGACGG CGCGACGGTG
CTGGTCATGG AACGCGGCGT CAGCAACGTC AGACAGCTGC TTCAGAACGG TGCGGACCTC
GGCGACGGGG AGCGGATCCT GGCGGAGGTC TGTTCGGCCC TGGCTTTCAT GCACGACGCC
GGCTGGGTGC ACGGCGACGT GAAGCCCGGC AACGTGCTGT TGATGGCCGA CGGCAGCGCG
CGCCTGGCCG ACTTCGGCGT CACGACGGAA CTCGACGGCA CGCACGCCTA CGCGCCGCGG
ATCGGCTCCT CGGACTACCT TCCGCCGGAA TGGTGGTCCG AGCAGGTCGG GGAACAGGGC
ATCGCGCTGC GTCCGACCGC GGACATCTGG GCCTTCGGAA TCCTGACCCA CCAGGTGCTC
GCCGGCGGGC GTCACCCCTT CGCCGGCGCC TCACCGCACG CCCGGGCGAT GAGCGCGCAG
GCCTACGCCC ACACCGGCGA AGGCCTGCTC CTGGACGAGC GGATCGCAGA ACCCTGGCGG
TCGCTGATCA GGGACTGTCT CGCGCCCGAT CACGCCCGGC GCGGCGCCGT CACGGCGCGG
AGTCTGGCCG AGCGGATCGG CCGCGCCGGT GGCAGTGGGC ACGGTGATCG CAGTGCGCAC
AGTGAGCACA GCGAGCACGG GACGGCGCAG CCGACAGGGC CTTCCACGCG TCGCAGAGTC
CTGATTCCAG CGGTCGCGGT GGCGGCGGTC GTCGCGATCG TCGCGGTCGC GGCGACGGTC
CTCGTTCTCA AGAACGGCTC GCAGGGGAAG ACCGCCGCTT CCTCGCCGCA CACCGGCACG
GTCACCGGGC CGGCCGCCGC ACCGGCCACC GGCGCAGCGG GCAGTCCCCG GTCCGCTCCG
GCGCTCACCC GAGGCGAACT GCGCCCCGAC GCCGCGGTCC CCGCCGAATA CCGCGACGTC
ATCAGCCGCG CGGCCCACGC CTGCCCGACG CCGGAAGTCA CGCCGGCCAT GGTCGCGGCC
GTGCTGAAAG TGGAGAGCGG CTTCGACCCG AAGTTCTCCA GCCCGGCGAC CGACTCCTAC
GGCATCGCCG GCTGGACTCC GCGGGTCTTC ACCGCCTGGG CTCCCGGTCC GCGGGCCGAC
TACATGAACC CCGACGACGC CATCATGGCT GCCGGCCAGT ACCTGTGCTG GCTGGACGAG
GAGTTCATCA AGGAGCACCC GCCGGGCGAC CTGGCCGCGC TCACCGTCGC CGCGTACGAC
ACCAGCACCA AGGCGGTGAG CCAGGCCAAC GGAGTGCCGC CGAACGCCGT CGAGTTCACC
AACTCCGTGC TCGAATACGC TCGGGAATAC GCAGGCTGA
|
|---|
| Protein sequence | MDGAGNTGEP AAGAGARPVE VPDGFVVGRW RVTGYLGSGS WGSVYLGEAV GDAAVDGDPA
EVALKFLPPS VGTPGRRALL AEVVDRERRF SESIEHPALI RTVAVETAES GDAAVDGATV
LVMERGVSNV RQLLQNGADL GDGERILAEV CSALAFMHDA GWVHGDVKPG NVLLMADGSA
RLADFGVTTE LDGTHAYAPR IGSSDYLPPE WWSEQVGEQG IALRPTADIW AFGILTHQVL
AGGRHPFAGA SPHARAMSAQ AYAHTGEGLL LDERIAEPWR SLIRDCLAPD HARRGAVTAR
SLAERIGRAG GSGHGDRSAH SEHSEHGTAQ PTGPSTRRRV LIPAVAVAAV VAIVAVAATV
LVLKNGSQGK TAASSPHTGT VTGPAAAPAT GAAGSPRSAP ALTRGELRPD AAVPAEYRDV
ISRAAHACPT PEVTPAMVAA VLKVESGFDP KFSSPATDSY GIAGWTPRVF TAWAPGPRAD
YMNPDDAIMA AGQYLCWLDE EFIKEHPPGD LAALTVAAYD TSTKAVSQAN GVPPNAVEFT
NSVLEYAREY AG
|
|---|
| |