Gene Caci_2647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2647 
Symbol 
ID8333996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3032992 
End bp3033696 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content69% 
IMG OID644955798 
ProductFHA domain containing protein 
Protein accessionYP_003113404 
Protein GI256391840 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.345836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATGC TCGACCGTTT CGAACGGCGA CTGGAGAACT TGATCAGCGG GGGCTTCGCG 
CGTGCTTTCA AGGCCGAGCT CGTGCCGGCG GAGATCGCCG CGGAGCTGCG GCGGGAGTGC
GACGACACGG TCGTCGTCCG CGGGCAGGGA CGCTCGGTGG CGGCCAACGA CTACGTCGTG
CAGATGGCTC CCGAGGACTT CACCCGGCTC GCTCCGTACG CGACGGAGCT GGCGACACAG
CTGAACGACG CTGTCCGCGC GCACGTTAAC GAGCAGCGCT ACCTCCTGGT CGGACCGCTC
GCGGTACGGC TTGAGGCCGC CGAGGATCTC GCGGTCGGGG TATGCCGCGT CCGCAGTGTC
ACCCTGCCGG CCAACCAGCC CTCCGGTCCG AGTCCGCAGG GTCCACAGAG TCCGCAGAGT
CCGCGGCAGG CGTCGGCGCC TTGGCTGGAG ATGAACGGGA CGCGGATTCC GTTGTCCACG
CGGCAGATCA TCCTCGGGCG CAGTCCGGAC GCGGATGTCC GCCTGCACGA CCCGGGGGTC
TCCTCACGGC ATGCCGTGAT CCGTCTCGGC CGCTCCGCGA CCATCCAAGA CCTCGACTCC
ACGAACGGAA CCTTCGTGGA CGGCCGGCGG GTCCGCAATG CCGATCTGCA CGACGGAGCC
GTGATCGTCC TCGGCGGTGT TCGGGTGACG TTCCACGGCG CCTGA
 
Protein sequence
MAMLDRFERR LENLISGGFA RAFKAELVPA EIAAELRREC DDTVVVRGQG RSVAANDYVV 
QMAPEDFTRL APYATELATQ LNDAVRAHVN EQRYLLVGPL AVRLEAAEDL AVGVCRVRSV
TLPANQPSGP SPQGPQSPQS PRQASAPWLE MNGTRIPLST RQIILGRSPD ADVRLHDPGV
SSRHAVIRLG RSATIQDLDS TNGTFVDGRR VRNADLHDGA VIVLGGVRVT FHGA