| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2644 |
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| Symbol | |
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| ID | 8333993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 3028256 |
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| End bp | 3029812 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644955795 |
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| Product | Alpha,alpha-trehalose-phosphate synthase (UDP- forming) |
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| Protein accession | YP_003113401 |
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| Protein GI | 256391837 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.529156 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACAG GGCGTCGAGC CGATTTCCTG GTGGTGGCCA ACCGGCTGCC GGTCGATCTG
GAGCTGCTGG ACGACGGAAC CGAGCGCTGG CGTCAGAGCC CCGGCGGCCT GGTGAGCGCG
CTGGAACCGA TTCTGCGGGC CCGCAACGGC GCGTGGATCG GCTGGTCGGG CCAAGCCGAC
CAGGATCTGG ACTCTTTCGA CGACGACGGA CTGGTGATGC ACCCGGTCCG GTTGTCCTCC
GACGAGGTCC GGGACTACTA CGAGGGTTTC TCCAACGCCA CGCTGTGGCC GCTGTATCAC
GACGTCGTCG TCCCGCCGGT CTTCGAGCGT TCGTGGTGGG AGAGCTACGT TGAGGTGAAC
CAGCGGTTCG CCGACGCCGC CGCGGCGGCG GCAGCCCCGG GAGCCACCGT GTGGGTCCAG
GACTATCAGC TGCAGCTCGT CCCGGCGATG CTTCGCGAGC AGCGCCCTGA TCTGCGCATC
GGCTTCTTCC TGCACATCCC GTTTCCGCCG GTGGAGCTGT TCATGCAGCT GCCGTGGCGC
AAGGAGCTCG TGCGCGGTCT GCTCGGCGCC GACGTCGTCG GGTTCCAGAT GCCCGGGGGA
GCGCAGAACT TCCTGTGGCT CACCCGGCGG CTGCTCGATC TGGAACCGTC GAAGGCGGCC
GTGCGCGTCG GCAACCGTCC CGGGTCGGTG TCGTTCGACG GCCGCCAGGT CCGGGTCGGC
GCATTCCCCA TTTCCATCGA CGCCGCCTCT TTCGACAAGC TGTCACGGCG AAGCGACACC
CTTGAGCGTG CCCGGCAGAT CCGTTCAGAC GTCGGGAACC CGCACCGCGT GCTGTTGGGC
GTGGACCGGC TGGACTACAC CAAGGGTATT GACGTGCGGC TGCGCGCCCT GCGCGAGCTG
CTCGTGTCAG GGCGCGTGGA TCCGGAGTCG GTGACCATGA TCCAGCTGGC CACGCCGAGC
CGGGAGCGCG TCGACCAGTA CAAGGCGATG CGACGCAGCA TCGAGCAGCA GGTGGGGCGG
CTCAACGGCG AGTTCGGCCG GGTCGGGCGC CCGATCGTGC ACTACCTGCA CCAGCCGGTC
GGCCGGGAGG AGCTGGTCGC CCTGTACCAG GCGGCCGATG TCATGGTGGT CACGCCGCTG
CGCGACGGCA TGAACCTGGT GTGCAAGGAA TACGTCGCCT CGCGGCACGA CCTGGACGGC
GTGCTGGTGC TGTCCGAATT CGCCGGCGCG GCTGCGGAAC TGACCAGCTC CCTGCGCGTC
AACCCGCATG ATCTGGACAG CGTCGCGAAC GCGTTGGAGC AGGCACTGAC CATGGATTCG
GCGGAGCAGC GGGAGAGGAT GCGCACCGCG CGCCGCCAGG TGATGACCAA TGATGTGGAT
CGGTGGGCAC GGTCCTTCCT CGACTTCCTG GAGCCCGTCC CGGCGGCACC GGAGGCGGCG
ACGGTGAAGG AAGTCCCGGG CGCGACGGCG CTGACGGGCG CGCTGACGAA GCTCGGCGCG
GCGTCCTTGA TCAAGCCGGC GGCGATCAAC GATGGGATGG CGAAGCCCGC GGCGTGA
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| Protein sequence | MMTGRRADFL VVANRLPVDL ELLDDGTERW RQSPGGLVSA LEPILRARNG AWIGWSGQAD
QDLDSFDDDG LVMHPVRLSS DEVRDYYEGF SNATLWPLYH DVVVPPVFER SWWESYVEVN
QRFADAAAAA AAPGATVWVQ DYQLQLVPAM LREQRPDLRI GFFLHIPFPP VELFMQLPWR
KELVRGLLGA DVVGFQMPGG AQNFLWLTRR LLDLEPSKAA VRVGNRPGSV SFDGRQVRVG
AFPISIDAAS FDKLSRRSDT LERARQIRSD VGNPHRVLLG VDRLDYTKGI DVRLRALREL
LVSGRVDPES VTMIQLATPS RERVDQYKAM RRSIEQQVGR LNGEFGRVGR PIVHYLHQPV
GREELVALYQ AADVMVVTPL RDGMNLVCKE YVASRHDLDG VLVLSEFAGA AAELTSSLRV
NPHDLDSVAN ALEQALTMDS AEQRERMRTA RRQVMTNDVD RWARSFLDFL EPVPAAPEAA
TVKEVPGATA LTGALTKLGA ASLIKPAAIN DGMAKPAA
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