Gene Caci_2641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2641 
Symbol 
ID8333990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3024212 
End bp3025450 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content69% 
IMG OID644955792 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_003113398 
Protein GI256391834 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.319989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.949284 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGA ACCACCCGTA CGTGATCGTC GGCGGCGGTC TGGCCGGCGC GAAAGCCGCC 
CAAGCCTTGC GGGAGCAGGG ATTCGACGGT CCGGTGGTCC TGATCGGCGA GGAAACCGAG
CGGCCCTATG AGCGTCCGCC GCTGTCGAAG GGCTATCTGC AGGGCAAGGA CGAGCGGGAG
AAGATCTTCG TCCATCCCCA GGACTGGTAC GCCGAGCACG ACGTCGAGCT GCGCCTGGGC
ACCGGAGCAG TCGCCCTCGA CACGGCGGCG CACCGCGTGG AGCTCGCCGA CGGCAGCCAG
GTCGAGTACG CCAAACTCCT CCTCGCCACC GGCTCCTCTC CCCGCCGCCT CCCGATCCCC
GGCGCCGACC TCGACGGAGT GAGGTATCTG CGACGGGTCG AGGACAGCGA ACAGCTCAAG
GCGGACTTCC AGCCCGGCGC GCGCATCGTG GTCATCGGCG CGGGGTGGAT CGGCTTGGAG
GCCGCGGCCG CCGCCCGAGC CGCCGGCGCG GACGTCACCG TGCTGGAGGC GGCTGAGCTG
CCGCTGCTGC GGGTCCTGGG CTCCGAGACG GCGCAGATCT TCGCCGACCT GCACCGGGAC
CACGGCGTGG ACCTGCGGTG CGGCGTCGAG ATCGTCGAGA TCACCGGCAG CCTGGGCAAG
GCCGACGGCG TCCTGCTCGG CCACGGCGCC GGCCGCATCG CAGCGGACGT GGTCCTCATG
GGCGTGGGCA TCACCCCGAA CACCGCCCTG GCCGAATCCG CCGGCCTGAA GGTCGACAAC
GGCATCGTCA CCGACGAGCA CCTGCGCACC TCCGCACCCG ACGTCTACGC CGCCGGAGAC
GCAGCCAACG CCTTCCACCC CTTCTTCGGC AAGAACATCC GCGTCGAGCA CTGGGCCAAC
GCCCTGAACC AGCCCCAAAC CGCCGCGAAG TCCATGCTCG GCCAGGACGC CACCTACGAC
CGCCTGCCGT ACTTCTACAC CGACCAGTAC GACCTGGGCA TGGAGTACAC CGGCCACGCC
GAGCCGGACG CATACGACCG CGTCGTGTTC CGAGGCGACG TCGCAGGACG CGAGTTCATC
GCCTTCTGGC TGTCGGAAGG CCGCGTCCTC GCGGGAATGA ACGTCAACGT CTGGGACGTG
ACCGACCCCA TCAAGGCCCT GATCACCTCG CGGACCGTGG TGGACCCGGA GCGTCTCGCC
GATCCCGATG TGGCGCTGGA GTCATTGGTG AGCTCGTGA
 
Protein sequence
MTENHPYVIV GGGLAGAKAA QALREQGFDG PVVLIGEETE RPYERPPLSK GYLQGKDERE 
KIFVHPQDWY AEHDVELRLG TGAVALDTAA HRVELADGSQ VEYAKLLLAT GSSPRRLPIP
GADLDGVRYL RRVEDSEQLK ADFQPGARIV VIGAGWIGLE AAAAARAAGA DVTVLEAAEL
PLLRVLGSET AQIFADLHRD HGVDLRCGVE IVEITGSLGK ADGVLLGHGA GRIAADVVLM
GVGITPNTAL AESAGLKVDN GIVTDEHLRT SAPDVYAAGD AANAFHPFFG KNIRVEHWAN
ALNQPQTAAK SMLGQDATYD RLPYFYTDQY DLGMEYTGHA EPDAYDRVVF RGDVAGREFI
AFWLSEGRVL AGMNVNVWDV TDPIKALITS RTVVDPERLA DPDVALESLV SS