Gene Caci_2621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2621 
Symbol 
ID8333970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3003991 
End bp3004947 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content74% 
IMG OID644955773 
ProductATPase BadF/BadG/BcrA/BcrD type 
Protein accessionYP_003113379 
Protein GI256391815 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2971] Predicted N-acetylglucosamine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.248705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTTA CCTCCCCTAA CCCCGCTGTA GTCGGCATCG ACATCGGCGG CACCAAGACC 
CATCTGGCGG TCGGCGCGGT CGGCGCAGTC GGCGCAGTCG GTACGAGCAG CACCGACGCC
GCCGTGCGCG AGCACGTCGT CGCCACCTCC GCCTGGCGCA CCGCCGACGT CGTCGCCGAC
GCCAAGGCGC TGGCCGAGCT GATCGGCCGG CATCTCGGGG AGGAAGCGAA AAGCCTGCCC
ACGGCGCTCG GCGCCCACGG CTGCGACAGC ACCGAGCAGT GCCTGGCCCT GGAGGCCGAG
CTGTCCCGGC ACCTGGCTGG ACCGGTCCGC GTGGTCAACG ACGCCGAGCT CATGACCTGG
GCGATGGGCG TCGCCGACGG GATCGGCGTG GTCTCCGGCA CCGGCTCGAT CGCCGTGGCG
CGCGACCGGC ACGGCCGCCT GGTCACCTCC GGCGGCTGGG GCTGGGTGCT CGGCGACGAG
GGCGGCGCGG CCGGCATCGT CCGGGAGGCC GTCCGCGCGG TGCTGGCCGA GCTGGACGCC
GGGGGAGGGC AGGACCCGCT GGTCGCGGCC CTGTTCGCCG GCTTCGGCGT CGACGGCGGG
CCGGAGCTGG CGATGGCTTT GACCCGCCGC AGCTCCGCCG ACTGGTGGGG CAGCCACGCC
GGTCTGGTCT TCGCCGCCGC CGATCAGGGC TCGCGGATCG CCGGCCGGGT GGTGGACGAG
GCCGGGACCC AGCTGGCCGG TCTGGTCACG CGGCTGCTGG CCCGCGGCGT CCGGACCGAG
CACGTCGTGA TCGGCGGCGG CGTCGTCACC GCACAGTCCC GGCTGCGCGA GAAGTTCCTC
AGCATCCTGG CCCGCGACCG CCCGGAGCTG TCCGTATCCG TTCTGGATCG ACCCCCTGTC
ACCGGGGCCC TAGCGCTGGC CATGTCTCTC GTCCCTCACC TGGAGGCCAC TTCATGA
 
Protein sequence
MSVTSPNPAV VGIDIGGTKT HLAVGAVGAV GAVGTSSTDA AVREHVVATS AWRTADVVAD 
AKALAELIGR HLGEEAKSLP TALGAHGCDS TEQCLALEAE LSRHLAGPVR VVNDAELMTW
AMGVADGIGV VSGTGSIAVA RDRHGRLVTS GGWGWVLGDE GGAAGIVREA VRAVLAELDA
GGGQDPLVAA LFAGFGVDGG PELAMALTRR SSADWWGSHA GLVFAAADQG SRIAGRVVDE
AGTQLAGLVT RLLARGVRTE HVVIGGGVVT AQSRLREKFL SILARDRPEL SVSVLDRPPV
TGALALAMSL VPHLEATS