Gene Caci_2618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2618 
Symbol 
ID8333967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp3000647 
End bp3001759 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content71% 
IMG OID644955770 
Productsugar isomerase (SIS) 
Protein accessionYP_003113376 
Protein GI256391812 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCGC AGACCAGCAC CGGCCCGAGC ACTAGCGAAG GCACGAGCAC CGCCACGCCG 
ACAACCCGCA TCCCCTACAT CGAGGGCCGC GACAAGCAAC CGCAGGCGCT GGAACGCGTC
GTCGCCCACA TCGGCGCGGC ACTCGCGGGC CCGACCGCCG ACCGGCTGAG CGCAGTCAGG
CGTCCCCTGT TCACCGGGAT CGGCGCGTCG CACGCGGCGC TCGCCGTCCC GGTCGAACGG
CTGCGGGCCG CCGGCATCGC AGCCCAGCGC GTCCTGGCCC ACGAGATCTG CGACAACGCC
AAGGGATTCG ACACCGACCT GGTCGTCGGG GTGTCGCAGA GCGGACGCAG CTCGGAGACC
ATCGCCGCGT TCAAGGCACT CGACCACGCG GCGCGCCTCG CGGTCCTGAA CGTCACGCCG
TCCCCGCTCG GCGAGCTGGC GACGCTGACG GTCGACCTCG GCAACGAGCC GGACTCGTTC
GCCTCGACCA TCGGCTTCAC CGGGACCGTC GTCGCCCTCG ACCTCATCGC CGCCGCCATC
GCCGGGGAGC GCGACGCGGC GCAGGGCTGG AGCGGCATCG CTGAGAAGGT GGCAGCGGTC
CGGACGCACG CCGCAGACGT CATCAGCACC CTGAGTGAGC GTGCAGGCCT GTGCGTCGCG
GCCGACTTCG TGGCCTCCGG AGCGTCCCGC GCCTCAGCTG AGGAGGGCGC ACTGCTCCTG
CGCGAAGTCG CCCGGACTCC GTCTGCCGCC TCGGCAACGC GGAACTATCT GCACGGCGAA
ATGGAATCCG CGGGCCGCAC GCTGCACGTC GTCTTCGGCG ACGGCCGGGA GATCGAGCTC
GCCCGCACCT TGGCCGACGC GGGGCATCTC ACGGTGCTGA TCACAAGCAT GGACGCAGCT
CTCGTCGCCA ACCTCGCCGT CATACGAGTG CCAGCCGCCA CACCGGCAGC GCGAGTAGTC
CTGGAGACGG TCGTCACCCA AGAACTCGCC GCGGCGCTCG CCGTCGAGCG GCAGGTCCCG
GTCGAAGGAT TCGTCTTCGC CAACAACGAC ACCAAACAAG GCGGCCTGGA CCCGGCAGCC
TTCGCCGCGA GGTCGTCGAC CGCGAGCGAA TAG
 
Protein sequence
MESQTSTGPS TSEGTSTATP TTRIPYIEGR DKQPQALERV VAHIGAALAG PTADRLSAVR 
RPLFTGIGAS HAALAVPVER LRAAGIAAQR VLAHEICDNA KGFDTDLVVG VSQSGRSSET
IAAFKALDHA ARLAVLNVTP SPLGELATLT VDLGNEPDSF ASTIGFTGTV VALDLIAAAI
AGERDAAQGW SGIAEKVAAV RTHAADVIST LSERAGLCVA ADFVASGASR ASAEEGALLL
REVARTPSAA SATRNYLHGE MESAGRTLHV VFGDGREIEL ARTLADAGHL TVLITSMDAA
LVANLAVIRV PAATPAARVV LETVVTQELA AALAVERQVP VEGFVFANND TKQGGLDPAA
FAARSSTASE