Gene Caci_2614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2614 
Symbol 
ID8333963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2997601 
End bp2998791 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content71% 
IMG OID644955766 
Product2-hydroxyglutarate dehydrogenase 
Protein accessionYP_003113372 
Protein GI256391808 
COG category[R] General function prediction only 
COG ID[COG0579] Predicted dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCAATG TCGTGATTGT TGGGGGCGGG ATCGTCGGTC TGGCCGTGGC CTGGGAGCTG 
ACGGGGCGGG GGCTGGGCGT CACCGTTCTG GAGAAAGAAG CTGGCTGGGC CGCGCATCAG
ACTGGCCACA ACTCGAACGT CGTTCATGCC GGGCTCTACT ACAAGCCCGG CTCGTTCAAG
GCACGCATGT CCGTCGCGGG CAACCGGTCC ATCGTGGAGT TCGCGCGGGA GCACGGTGTG
CCCGTCGAAG TCTGCGGCAA GCTCGTCGTC GCGACCGGGG ATGAGGAGAT TCCGGCGCTC
GACACGCTGG CGGAGCGGGC CGTGGCCAAC GGCGTGCCGG CGAAGCGGAT TACGCCGGCC
GAGGCTCGAG AGTACGAGCC TGAGGTTGCC TGCGTCGCCG CGCTGCGGGT CGAGTCCACC
GGGATCATCG ACTATCCCGG CGTCTGTGCC GCGCTGGTCC GGCTGCTTGG CGAGGCCGGC
GCCGATCTGC GGCTGAACAG TGCCGCGCTC GGGATCCGGG CTGGGCGCAA CGGTGGCGTC
GAGGTCGCGA CCGCGTCCGG CGTGGTGCGC GCCGACGCGC TGGTCAACTG CGCCGGGCTG
CACTCCGATC GGGTGGCGCG GCTGGCTGGG CTGACGCCGT CGGCGCAGAT CGTGCCCTTC
CGTGGTGAGT ACTACGAGCT TCGGCCCGAG CGCCGTCACC TGGTCAAGGG TCTGATCTAC
CCCGTGCCGG ACCCGACGCT GCCGTTCCTG GGCGTGCACC TGACGAGGAT GCTCGACGGC
AGCGTGCACG CCGGGCCGAA CGCCGTGCTG GCGCTGCGCC GCGAGGGCTA CCGCTGGACC
GACTTCTCCG CGAAGGACGT CGCCGAGGTG GCGGCCTTCC CCGGCACCTG GCGGCTCGCG
CGCCGGTACG CGATCCCGAC GGGCTTGGAC GAGGTCCGCC GCTCGTTCTC GAAGAAGCGC
TTCGCCGCGA GCCTGGCCCG CCTGGTCCCG GCCGTCACCG AGGACGACAT CGTGCGCCAC
GGCTCGGGCG TCCGCGCCCA AGCCATGCGC CGCGACGGCT CCCTCGTCGA CGACTTCCTC
ATCGAGACCG CCCGCGACCA GGTCCATGTC CTGAACGCCC CGTCGCCCGC CGCGACGAGC
GCCCTGGAGA TCGCACGCCA CATCGCGGAC CGGGTGACGC AGGACCGGTG A
 
Protein sequence
MRNVVIVGGG IVGLAVAWEL TGRGLGVTVL EKEAGWAAHQ TGHNSNVVHA GLYYKPGSFK 
ARMSVAGNRS IVEFAREHGV PVEVCGKLVV ATGDEEIPAL DTLAERAVAN GVPAKRITPA
EAREYEPEVA CVAALRVEST GIIDYPGVCA ALVRLLGEAG ADLRLNSAAL GIRAGRNGGV
EVATASGVVR ADALVNCAGL HSDRVARLAG LTPSAQIVPF RGEYYELRPE RRHLVKGLIY
PVPDPTLPFL GVHLTRMLDG SVHAGPNAVL ALRREGYRWT DFSAKDVAEV AAFPGTWRLA
RRYAIPTGLD EVRRSFSKKR FAASLARLVP AVTEDDIVRH GSGVRAQAMR RDGSLVDDFL
IETARDQVHV LNAPSPAATS ALEIARHIAD RVTQDR