Gene Caci_2571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2571 
Symbol 
ID8333920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2912704 
End bp2914074 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content67% 
IMG OID644955724 
ProductFG-GAP repeat protein 
Protein accessionYP_003113330 
Protein GI256391766 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAACG CCCTCCGTGC CGAAGGCACG CGGACCGCAA CTGGACGCCG GCGCCTCGCC 
GGCCTCCTCG CCACGGCAGT CGCCCTGATC ACCGCCGCCG CTATGGCGCC CGCGTCAGCG
GCGGCCGGCA CCGGAAGCGC GTCCTCCGCA ACCACCGTCC AGCCCGACAC CGGCACCTCC
ACGGCCGGCG GGCCCATCAG CCGCGCCGAG ATCCAGGCGC GCGCCCAGGA CTGGGTGAAC
GAGCGCGTCC CGTACAGCGA GTCGCTCCAC TGGACGGATT CCAACGGCAC CTACCGCCAG
GACTGTTCAG GCTTCATCTC CATGGCCTGG CACCTGGCGC CCGACCAGAA TTACGGCGCG
ACGACGTGGT CCCTCCCGGA CTTCTCCACC AAGCTGTCCT CCCTGGACGA CCTCCAGCCG
GGCGACATGA TCGACAACAT CAACACCCAC GTCGTGATGT TCCTGGGCTG GACCTCCAGC
AGCCACAGCA CGGCGATCGT CGCCGAGGAA GCCCACTCCG GCACCGTCGC CCACGTCGAT
TCCTCGTACT ACACGCGCTC GTACCTGCTC AACAACGGCT ACGAGCCGTT CCGCTACAAC
AAGGTGACCG AGTACCCGAG CAAGATGGGC GAGATCACCG ACGTCGGCGA CCAGAACGGC
GACGGCGTCG ACGACTTCAC CGCTGTCGAG CGCTCCTCCG GGTTCCTGTA CCTCTACACC
AGCCCGGGCT ACTCCGGCAC CGACCGGCAG AAGCTCGGCT GGGGCTGGAA CACCATGCGC
GACATCGCCG CTGTCGGTGA CCACAACGGT GACGGGAAGG TCGATCTCGT CGCGGTCAAC
ACCTCCGACA ACCATATGTA CCTGTACTAC GGCCCGGACT TCTCCGGGAC CACCCGCGTC
GACCTCGGCG GCGGCTGGAG CAGCTACAAG GACATCGCCG CGGTCGGCGA CCACAACGGC
GACGGCATTC CGGACTTCGT CACCACCGAC AGCAGCACCG GAAACCTTTA CCTGTACACA
AGCCCGAACT ACCTCGGCAG CCAGCGGCAG CAGACCGGCA CCGGTTGGAC CGGGACGCGC
GACATCACCG ATGTCGGCGA CCACAACGGT GACGGCAAGG ACGACTTCGT CGCGGTCAAC
ACCTCCGACA ACCACATGTA CCTGTACTAC GGCCCGGACT TCTCCGGGAC CACGCGCGTC
GACCTCGGCG GCGGCTGGAG CGGCTACACG GACATCGCCG CCATCGGCGA CCACAACGGC
GACCACCAGC CGGACTTCGT CACGACCGAG ACCAGCACCA ACTTCCTCTA CCTGTATTCG
AGCTCGAACT ATCTCGGCAG CTCGCGCCAG AAGATCGGCA CCGGCTGGTA A
 
Protein sequence
MNNALRAEGT RTATGRRRLA GLLATAVALI TAAAMAPASA AAGTGSASSA TTVQPDTGTS 
TAGGPISRAE IQARAQDWVN ERVPYSESLH WTDSNGTYRQ DCSGFISMAW HLAPDQNYGA
TTWSLPDFST KLSSLDDLQP GDMIDNINTH VVMFLGWTSS SHSTAIVAEE AHSGTVAHVD
SSYYTRSYLL NNGYEPFRYN KVTEYPSKMG EITDVGDQNG DGVDDFTAVE RSSGFLYLYT
SPGYSGTDRQ KLGWGWNTMR DIAAVGDHNG DGKVDLVAVN TSDNHMYLYY GPDFSGTTRV
DLGGGWSSYK DIAAVGDHNG DGIPDFVTTD SSTGNLYLYT SPNYLGSQRQ QTGTGWTGTR
DITDVGDHNG DGKDDFVAVN TSDNHMYLYY GPDFSGTTRV DLGGGWSGYT DIAAIGDHNG
DHQPDFVTTE TSTNFLYLYS SSNYLGSSRQ KIGTGW