| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2555 |
|---|
| Symbol | |
|---|
| ID | 8333904 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 2892775 |
|---|
| End bp | 2895189 |
|---|
| Gene Length | 2415 bp |
|---|
| Protein Length | 804 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644955708 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003113314 |
|---|
| Protein GI | 256391750 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.194451 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGTC AGCGCCACGA CCCCGATCAC CCCCACCCCT CACGCAGGGG CGTGCTCGCT
TTCGCCGCCG TAGCCGGCGC GGCGGCCACC ACCTTCGGTA TGCGTCCCGC TTTCGCCGCC
ACCTCGGCGC CGGTGCGCCC GACCCGATCC CCGCTGCTGT CCGCGGCTCA GGCCGCGAAG
AACCAGCTGT GGTGGCAGGC GCCCGGCTCG CCCTCCTCGC TGATCGAGCA GGGTTTACCG
GTCGGGAACG GACGGCTCGG CGCACTGGCG AGCAACGACC CCGGCAGCGA ATTCCTCACC
GTCACCGACG ACTCCCTGTG GACCGGCGAC CGCAACGACA CGCTGCAAAG CGACGGCCAG
TTCCCTTACA GCGCCAACGA TTTCGGCTCC TTCGCCATCC TCGCTCAGCT CACCGTCGCC
ATCCCGGCGC ACGACCTGAG CGTCGTCAAC AATTACCGCC GCACGCTCGA CCTGGCTCAG
GGCGTGCTCA GCACCTCCTA CGAGGTCAAC GGCGTCCGCT ACGACCGGCA GATCTTCGCC
AGCCGCCCCG ACGACGTCAT CGTTCTGCGA TTCACCCAGC ACGGCGGCGG CTCGTACACC
GGTACCGTCT CCCTGGCCGG CACGCACAGC GAGACCACCA CCGTTGACGG CTCGGCGGCG
CTCGCCTCGT TCGGCGGCGC GCTCGCCAAC GGTCTGAAGT ACGGCGCCGC GCTGACCGCC
AGCAGCAGCA CCGGCAAGGT CGCCGTCAAC GGGTCTTCGC TGTCCTTCAC CGGTTGCCAG
GACCTCACCG TCATCGTCAG CGGCGGCACC GACTATGTGG CGAACTTCGC CACGGGATTC
CGCGACTCGG CTGTCGATCC GCTCAGTCTG GCGCGGACCA AGGTCCTCGC CGCGGTCAAG
CAGTCGCCGA CCGCGTTGCT GTACACGCAC GTCGCAGACT TCCTCGCGGC GTTCGGCACG
TTCGACGTCG ATTTCGGCGC GTCGTCGGCG CCGCAGAAGG CGCTGGACAC CTGGGACCGG
ATTCAGGCTC GCGATCGCGA CGACATCCCC GACCCGGAGA TGGAAGCCGC CTACGTGCAG
TTCGGTCGCT ACCTGATGAT CTCCGGATCG CGGGGCGGTC TGCCGCTCAA CCTCCAGGGT
CTGTGGCTCT CGGACAACAA TCCGGCGTGG ATGGCTGACT ACCACACCGA TATCAACATC
CAGATGAACT ACTGGATGGC TGACCGCGTC GGCTTGTCAG ACTGCTTCGA CACGCTCGCC
GACTACTGCC TCGCGCAGCT GCCTTCCTGG ACGGACGTCA CCCAGCGTCT GTTCAACAGC
CCGACCAACC GCTACCGCAA CTCCAGCGGC AAGATCGCCG GCTGGACCGT CGCGATCTCG
ACCAACCCCT GGGGTGGCGG CGGCTGGTGG TGGCACCCGG CCGGCAACGC CTGGCTGTGC
CACAACCTCT TCGAGCACTA CGAGTACACC CAGGACCGCG CGTACCTCGA GAAGATCTAC
CCGCTGATCA AGGGCGCCGT GGAGTTCTGG GAGGCGCGCC TGATCACCAC GACCGTGACC
GACCCCTCGG GCGGTACCCG GGAGGTCCTG ATCGCGGACA GCGACTGGTC GCCCGAGCAG
GGTCCGCTCG ACGCCAAGGG CATCACCTAT GCCCAGGAGC TGGTGTGGAA CCTGTTCAGC
CACTACCAGA GCACCACACA GATCCTCGGT CGTGACCTCG CCTACAGCCA GACCGTCGGA
GGGCTCCAGC AGAAGCTCTA CCTGCCGGTG GTCAGCCCGA CGACGGGATG GTTGGAGGAA
TGGATGACCC CTGACAACCT CGGCGATCCC CAGCACCGCC ACCTGTCTCC GCTGTTCGGG
CTGTTCCCGG GCGACCGCAT CCGTCCCGAC GGCTCGACCC CGACGGACAT CGTCACCGGC
GCTACCGCGT TGCTCACCGC GCGCGGGATG AACAGCTACG GCTGGGCCAA CGCCTGGCGC
AGCCTGTGCT GGTCGCGGCT GAAGAACTCG AAGAACGCCT ACCAGCTCTA CGTCAACAAC
CTGAAGCCCT CGACCAACGG CAGCAACGGC ACCGCGCAGA ACCTGTTCGA CATCCTCAAC
CTCTCGGCCG GCAGCGGAGC CTTCCAGATC GACGCGAACT TCGGCTCGCC GTCCGCGGCC
GTCGACATGC TGATCTACTC GCGTCCCGGA TACGTCGAGC TGCTGCCCGC GCTGCCCGCC
GAGTGGGCCG CCTCGGGTTC GATCACCGGC GCGGGCGTGC GCGGCGGCTT CACCGCCGAC
ATCACCTGGA AGAACGGCAA GGTCACCCGG GCGGCGCTGC ACAGCGTCGG CGGCCGGAGC
ACCACGGTGG TCGTCAACGG CAGGTCGCAG GCCGTGAACC TGCACGCCGG CCAGTCAGTC
AGCCTCGCGC ACTAG
|
|---|
| Protein sequence | MDSQRHDPDH PHPSRRGVLA FAAVAGAAAT TFGMRPAFAA TSAPVRPTRS PLLSAAQAAK
NQLWWQAPGS PSSLIEQGLP VGNGRLGALA SNDPGSEFLT VTDDSLWTGD RNDTLQSDGQ
FPYSANDFGS FAILAQLTVA IPAHDLSVVN NYRRTLDLAQ GVLSTSYEVN GVRYDRQIFA
SRPDDVIVLR FTQHGGGSYT GTVSLAGTHS ETTTVDGSAA LASFGGALAN GLKYGAALTA
SSSTGKVAVN GSSLSFTGCQ DLTVIVSGGT DYVANFATGF RDSAVDPLSL ARTKVLAAVK
QSPTALLYTH VADFLAAFGT FDVDFGASSA PQKALDTWDR IQARDRDDIP DPEMEAAYVQ
FGRYLMISGS RGGLPLNLQG LWLSDNNPAW MADYHTDINI QMNYWMADRV GLSDCFDTLA
DYCLAQLPSW TDVTQRLFNS PTNRYRNSSG KIAGWTVAIS TNPWGGGGWW WHPAGNAWLC
HNLFEHYEYT QDRAYLEKIY PLIKGAVEFW EARLITTTVT DPSGGTREVL IADSDWSPEQ
GPLDAKGITY AQELVWNLFS HYQSTTQILG RDLAYSQTVG GLQQKLYLPV VSPTTGWLEE
WMTPDNLGDP QHRHLSPLFG LFPGDRIRPD GSTPTDIVTG ATALLTARGM NSYGWANAWR
SLCWSRLKNS KNAYQLYVNN LKPSTNGSNG TAQNLFDILN LSAGSGAFQI DANFGSPSAA
VDMLIYSRPG YVELLPALPA EWAASGSITG AGVRGGFTAD ITWKNGKVTR AALHSVGGRS
TTVVVNGRSQ AVNLHAGQSV SLAH
|
|---|
| |