Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2554 |
Symbol | |
ID | 8333903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2890829 |
End bp | 2892667 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644955707 |
Product | Carbohydrate binding family 6 |
Protein accession | YP_003113313 |
Protein GI | 256391749 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGTCAT CCTCGTACTT TCGCACTCCC AAAATCGCCG CCGCCGTCGT GGTCCTGGCT GTCGGCAGCC TCGCCTCGGC TGCCCTGACC GCAGCCGGTC CGGCCAACGC CGCGCAGGCA GCGCCGCCGC CGACCACTAC CGCCAACGCC GCCACGGTCG CCGCCACGCC CTTCATGGGC TGGTCGAGCT GGAGCATGCA GTCCTCGTCT TACCCGGGAC TGAACCCGAA CGGCAACTAC AGCTACCTCA CCGAAGCGAA CGTCCTGAAG CAGACCGACG CCCTGGCCGC CAAGCTCAAG GCGTACGGCT ACGACCACGT CGACATCGAC GCCGGCTGGT GGCGCGACAA CAACTGGACG CCGGAGTACG ACCAGAACGC CCGGCAGACC CCTGACCCGG TCCGCTTCCC GCACGGTATG CAGTCGATCG CCGACCACAT CCACTCCCAG GGACTCAAGG CCGGTATCTA CCTGCCGGTC GGTCTGGAGA AGGAGGCGTA CGGCGGCGGC ACCGTGCCGA TCGCGAACGC TCCCGGCTGC ACCACCGCCG ACATCGTCTA CCCGGACCTT CGCACCACCA ACGGCTGGGA CAGCTCCTAC AAGCTGAACT TCGCCAACGC CTGCGCGCAG AAGTACGTCG ACTCCCAGGC GCAGATGCTC GCCGGCTGGG GCTACGACTT CCTCAAGATC GACGGCGTCG GTCCCGGCTC GGGCAAGTCC GGCGACAACT ACGACAACAC CGCCGACGTG GCCGCCTGGA ACCAGGCGAT CGCCGCCACC GGCCGTCCGA TCCACCTGGA ACTGTCCTGG TCCCTGGACC GGGGCAACGC CGCCAACTGG AAGCAGTACT CCAACGGCTG GCGCGTCGAC ACCGACGTGG AGTGCTACTG CAACACGCTG GTCACCTGGG ACAACTCGGT CAAGGCCCGC TGGAACGACG CCCCGGTGTG GAGCGACGTG GCAGGTCCCG GCGGCTGGAA CGACCTGGAC TCCCTCGACG TCGGCAACGG CACGATGGAC GGCCTGACCA ACGCCGAGCG GCAGAGCTAC ATGACGCTGT GGGCGATCGA GAAGTCACCG CTGTTCACCG GTGACGACCT CACCCAGCTG GACAGCTACG GTCTGTCGCT GCTCACCAAC CGGGAAGTCA TCGGCATCGA CCAGAACACC TCGCCGGTGG CGCGTCCGGT CAGCACGATG CGCGACCAGC AGGTCTGGGC GACCAAGAAC GCTGACGGCA GCTACACCGT CGCGCTGTTC AACATGGCCG CCGCGCCCGA ATCGGTCAGC GCCTACTGGG CCGCGCTCGG ATTCCAGGGC AACGCCAGCG TCCACGACCT GTGGAACCAC CAGAACCTCG GCTCCTTCAC CAACCAGATC ACCGAGGCAC TGCCCGCCCA CGGCTCGCGG CTGTTCACCA TCACCCCGGC CGGCAGCACC AAGCCGGTGA AGACCACGAG CTACGAAGCC GAGTCCACGA ACAACACACT GACCGGCGGC GCCTCGCTCA CCGCCTGCAC CGCCTGTTCC GGCGGCTCAC GGGTCGGCAA CCTCTACGGA AGCGCCAAGC TTCAGGTCAA CAACGTCACC GTCAAGAAGG ACGGGATCTA CACCATCACC GTCTCCTACG TCGACGGCAG CACGGACCGG ACCGCGACCA TCTCCTCCAA CACCGGCAGC GGGACAAGCA TCGCCTTCCC CTCGACAGGC GACTGGAACA CCGTCCACTC CATCAGCTTC CAGCTGGGTC TGAAGGCGGG CTCGAACTCC ATCACCTTCG ACAGCGCCGG CTGGTACTCG CCCGACATCG ACAAGATCGA CGTCCCGGTT TCCTCCTGA
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Protein sequence | MRSSSYFRTP KIAAAVVVLA VGSLASAALT AAGPANAAQA APPPTTTANA ATVAATPFMG WSSWSMQSSS YPGLNPNGNY SYLTEANVLK QTDALAAKLK AYGYDHVDID AGWWRDNNWT PEYDQNARQT PDPVRFPHGM QSIADHIHSQ GLKAGIYLPV GLEKEAYGGG TVPIANAPGC TTADIVYPDL RTTNGWDSSY KLNFANACAQ KYVDSQAQML AGWGYDFLKI DGVGPGSGKS GDNYDNTADV AAWNQAIAAT GRPIHLELSW SLDRGNAANW KQYSNGWRVD TDVECYCNTL VTWDNSVKAR WNDAPVWSDV AGPGGWNDLD SLDVGNGTMD GLTNAERQSY MTLWAIEKSP LFTGDDLTQL DSYGLSLLTN REVIGIDQNT SPVARPVSTM RDQQVWATKN ADGSYTVALF NMAAAPESVS AYWAALGFQG NASVHDLWNH QNLGSFTNQI TEALPAHGSR LFTITPAGST KPVKTTSYEA ESTNNTLTGG ASLTACTACS GGSRVGNLYG SAKLQVNNVT VKKDGIYTIT VSYVDGSTDR TATISSNTGS GTSIAFPSTG DWNTVHSISF QLGLKAGSNS ITFDSAGWYS PDIDKIDVPV SS
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