Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2553 |
Symbol | |
ID | 8333902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2889598 |
End bp | 2890770 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644955706 |
Product | ROK family protein |
Protein accession | YP_003113312 |
Protein GI | 256391748 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTCCGA ACCGCTCCCC TCAGCCGCTG GCCGCCACCC CGGCCGCGAC CGCCGTGCTG GCCATGGTCC TGACCGAGGG CCCGCTCAGC CGGGTTGACC TGGCTCGGCG GCTCGGCATC TCCTCCGCCG CCGTCACCAA GGCCGCCCGG CCTTTCCTCG ACGACGGATA CCTGCACGAA CTCGACTCCG AGCGGACCGC GCCCGGCGCC GGCCGCCCGG TGAGCCCGCT GGCGATCACC CCCGACCGGG AGTTCGTCAT CGGAGTGAAG GTCACCGCCG ACGAAGTGAT CGGCGTCGTC GCCGATCTGA AGGCCCGGAT CAGGAACTCG GCGCACCGAC AGCTGCCGGA CTGCGAACCC GCCACGGTTC TGGCCACCCT GGCAGCCCTG GTCGAGGAGC TGCTCGACGC CGATCCCGAA CTGCGGGGCA AGACCCGCCG CATGGGAGTC GCGGTCTCCG GCGACGTGGA CCGGGTACGC GGGGTGGTCC GGCTGTCCCC GCTGCTCGGC TGGCAGGACG TCGACCTCGC CGGCCCGGTC GGCGACGCCA CCGGTCTGGT CGTCGTGGTC GAGAACGATG TCAAAGCCCT CACCGTCGCC GAGCACTGGT TCGGCGACGG CGTGGGGACC GACGACTTCA CGCTGGTCAC CGTCGGCGCC GGCATCGGCT GCGGCATCGT CACCGGCGGG CGCCTGCTCT CCGGCGCGTA CGGCGTGGCC GGGGAGGTCG GCCACGTCTG CGTCGACGCC TCGGGACCGG TGTGCCACTG CGGCGCGCGC GGCTGTGTCG AGGCGATCGC CGCCACCGAG GCGATCGTCG GCCGGGCCCG CCTCCTGACC GGGCGCGACG GCCTCACCTT CACTGAGGCC GCCGAGCTCG CCCGCTCCGG TTCCCCCGAG GTGTGCGCCT TGTTCTCCGA GGCGGGCACC GCCATTGGCC TCGCCATCAC CGCCGTGGTC AACCTGATCG GCCCGGAGCG GATCGTCGTC TCCGGCGAGG GCCTGGACGC CTACGACCTC TTCGAGACAG AAATCCGTCA GGCATACGCC ACCCATGCCT TCGGCGCTGC CGCGCGGTGC CCTTTGACCA TCCGTCCGCT GCCGTTCGAG GAATGGGCGC GCGGCGCCGC AGCTGTGGGC ATCCAGACCC TCTTCGCCCC GGCGCGCGGC TAG
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Protein sequence | MSPNRSPQPL AATPAATAVL AMVLTEGPLS RVDLARRLGI SSAAVTKAAR PFLDDGYLHE LDSERTAPGA GRPVSPLAIT PDREFVIGVK VTADEVIGVV ADLKARIRNS AHRQLPDCEP ATVLATLAAL VEELLDADPE LRGKTRRMGV AVSGDVDRVR GVVRLSPLLG WQDVDLAGPV GDATGLVVVV ENDVKALTVA EHWFGDGVGT DDFTLVTVGA GIGCGIVTGG RLLSGAYGVA GEVGHVCVDA SGPVCHCGAR GCVEAIAATE AIVGRARLLT GRDGLTFTEA AELARSGSPE VCALFSEAGT AIGLAITAVV NLIGPERIVV SGEGLDAYDL FETEIRQAYA THAFGAAARC PLTIRPLPFE EWARGAAAVG IQTLFAPARG
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