| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2539 |
|---|
| Symbol | |
|---|
| ID | 8333888 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 2870107 |
|---|
| End bp | 2871411 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644955692 |
|---|
| Product | peptidase S8/S53 subtilisin kexin sedolisin |
|---|
| Protein accession | YP_003113298 |
|---|
| Protein GI | 256391734 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4934] Predicted protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTGA AGAACTCCAC TGCGCGAGGC CCGGTCGGGC GGCGCGGGCT GCGCCTGGCG
ACCGTCGTCG CGGCGGCCTC GACCCTGGTG GCCGCGCTGA CGGTCACCGC GGCTTCGGCC
AGCGCGGGGG TCGCGAGCGC CGACCACGGC AAGGGCCCCA AGGCGGGCAC CGTCAAGAAC
GCCTGCGCCA CGGCGAAGCC CGGCACCGCC CGCTGCTTCG CCGAGATCCG CACCGATGTC
GCCGGCGGGA CCGGCGTCCG CGGACCGGCG GCGGCCAAGC TCGGCGCCGC GGCGAAGACG
ACCGCGCTGC CGGCCGGCTT CGGTCCGGCG GACCTGCACT CCGCGTACAA CCTGCCGACC
ACCGGCGGGG CGAATCAGAC GGTTGCGATC GTCGACGCCG GAGACGACCC GACGGCCGAG
GCGGACCTCG CGGTCTACCG CTCCACCTAC GGCCTGCCCG CGTGCACCAC CGCCAACGGC
TGCTTCACCA AGGTGAACCA GCGCGGCGCG GCCAGCCCGC TGCCGCCGGA CCAGGGCTGG
GGCGTGGAGA TCGCGCTCGA CGTGGACATG GTCTCGGCGG CGTGCCCGCA GTGCAAGATC
CTGCTCGTCG AGGGTGACTC AGCCTCCTTT GACGATCTGG GAAACTCGGT GAACGAAGCC
GTGGCGCTCG GCGCGACCGA GGTGTCCAAC AGCTACGGCG GCTCGGAGGG CAACGGCATA
GACGCCTATG CCGCGGACTA CTCGCACCCG GGCGTGGCGA TCGTCGCCTC CAGCGGTGAC
GGCGGCTACG ACATCCCGAA CGTCCCGGCC GAGTACACCA GCGTGGTCGC CGTCGGCGGT
ACCTCGCTGA CCAAGGCCGC CAACACCCGC GGCTGGACCG AGACCGCCTG GCAGGGCGCC
AGCAGCGGCT GCTCGGCGTG GGTGGACAAG CCGGCCTGGC AGACCGACGC CAACTGCCCC
GGCCGCATGG TCGCGGACGT CTCGGCGGAC GCCGACCCGA ACACTGGCCC GGCGATCTAT
GTCACCGACA CCCCCGACCT CGAGGGCCTG CCCTCCGGCT GGGGCATCGT CGGCGGCACC
AGCGCCTCCT CGCCGTTCGT CGCCGGCGTG ATCGCCCTGG CCGGCAACCC GCAGAAGTTC
CCGAACGCCT CGGCGTTCTA CAGCAACCAC AGCAGCCTGA ACGACGTGGT CGGCGGGAAC
AACATCTTCG GGATCGACTG CGGCGGCGAC TACCAGTGCA ACGCGGTCGC CGGCTACGAC
GGCCCGACGG GCTGGGGGTC GCCGAACGGC TTGTCCGCAT TCTGA
|
|---|
| Protein sequence | MNVKNSTARG PVGRRGLRLA TVVAAASTLV AALTVTAASA SAGVASADHG KGPKAGTVKN
ACATAKPGTA RCFAEIRTDV AGGTGVRGPA AAKLGAAAKT TALPAGFGPA DLHSAYNLPT
TGGANQTVAI VDAGDDPTAE ADLAVYRSTY GLPACTTANG CFTKVNQRGA ASPLPPDQGW
GVEIALDVDM VSAACPQCKI LLVEGDSASF DDLGNSVNEA VALGATEVSN SYGGSEGNGI
DAYAADYSHP GVAIVASSGD GGYDIPNVPA EYTSVVAVGG TSLTKAANTR GWTETAWQGA
SSGCSAWVDK PAWQTDANCP GRMVADVSAD ADPNTGPAIY VTDTPDLEGL PSGWGIVGGT
SASSPFVAGV IALAGNPQKF PNASAFYSNH SSLNDVVGGN NIFGIDCGGD YQCNAVAGYD
GPTGWGSPNG LSAF
|
|---|
| |