| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2533 |
|---|
| Symbol | |
|---|
| ID | 8333882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 2863407 |
|---|
| End bp | 2863808 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644955686 |
|---|
| Product | Roadblock/LC7 family protein |
|---|
| Protein accession | YP_003113292 |
|---|
| Protein GI | 256391728 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCCGGC CGCAGATGCA ATTGGACTGG CTGCTCCAGG GCCTCGTGGA CGGGGTGCCG
GGCGCCCGCC ACGCGCTCGT GCTCACCGGG GACGGCCTGC GGCTGGCGCA CTACGCCGTC
GACGAAGACG TCGCCGATCG CCTCGCCGCG ATCTGCGCCG GACTGCAAAG CCTGTCCTCG
GCGGTGGCGG AGATGTTTCC GGGCGGGGAC CAGCGCACGC GGATGATCGT CATCGAGGTC
GGAGGCGGCT ACTTCTACGT GATGGCCGCA GGCGAGGGTG CTTTTCTGGC CGTGGTGGCC
GACGACGGTG TGGACGCGGG GCTCATGGGA CGCCAGATGC GCGATCTCGT GGTCCGCATA
GGGGAGCACT TAGCAAGCCC GGCGCGCCGG GAGGGCCGGT GA
|
|---|
| Protein sequence | MIRPQMQLDW LLQGLVDGVP GARHALVLTG DGLRLAHYAV DEDVADRLAA ICAGLQSLSS
AVAEMFPGGD QRTRMIVIEV GGGYFYVMAA GEGAFLAVVA DDGVDAGLMG RQMRDLVVRI
GEHLASPARR EGR
|
|---|
| |