Gene Caci_2531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2531 
Symbol 
ID8333880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2862217 
End bp2862858 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content69% 
IMG OID644955684 
Productprotein of unknown function ATP binding 
Protein accessionYP_003113290 
Protein GI256391726 
COG category[R] General function prediction only 
COG ID[COG2229] Predicted GTPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.829271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTCCG GCGCCTCTGA CCGCGCCCTC GCCGCCGACG CGCGCGACAC CTCCGACGTG 
CCCGGCGCCG ACGTGCCCGG CGCCGGCCTG CCCGCGACCA CCTCGGTCGC CCTGAAGATC
GCGGTGGTCG GCCCGCTCGG CGTGGGCAAG ACCACCTTCG TCACCTCGGT GAGCGATATC
GCGCCGCTCA CCACGGAAGA GCCGATGTCC GGTCCGCCGC CGGCCGGCGT ACCGGCGACG
AAGACCACGA CGACTGTCGC CATGGACTTC GGCCGCATCA GCATCGACGA GCGAGTGGTC
CTCTACCTGT TCGGGACTCC CGGTCAGGAG CGCTTCTGGT TTCTGTGGGA CGGCTTGGTC
GAAGGGGCGT TGGGGGCGAT CGTGCTCGTG GACGTCCGCC GCCTGGAGGA GAGCTTCGAC
GTCCTGGAAC GCTTGGAGGA TCGCAGCGTT CCGTTCGTCG TCGCAGCGAA CTGCTTCCCA
GACGCCCCGG TGTATCCGGT CGAGGAGCTG CGCGCCGCGA TGGACCTGCC GACTCCGGTG
CCGGTCATCC TGTGCGACGC GCGGGAGCGG TCGTCGTGTC GCGACGTGCT GCTCGACTTG
AGCACCTATT TGCTGGAGCT GGTGCCGAAC ACGATGCGGT AG
 
Protein sequence
MVSGASDRAL AADARDTSDV PGADVPGAGL PATTSVALKI AVVGPLGVGK TTFVTSVSDI 
APLTTEEPMS GPPPAGVPAT KTTTTVAMDF GRISIDERVV LYLFGTPGQE RFWFLWDGLV
EGALGAIVLV DVRRLEESFD VLERLEDRSV PFVVAANCFP DAPVYPVEEL RAAMDLPTPV
PVILCDARER SSCRDVLLDL STYLLELVPN TMR