| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2530 |
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| Symbol | |
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| ID | 8333879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2861180 |
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| End bp | 2862253 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644955683 |
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| Product | Thaumatin pathogenesis-related protein |
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| Protein accession | YP_003113289 |
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| Protein GI | 256391725 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.699481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGGC ATCGCAGCGG ACGCCGGGCG TATCGACCGA TCGTGGCCGG CGGACTGGCC
GCTGCGGCGG CGCTCGCTTT GGTGCTCTGG ATCGCCGGAT TCGGGTCGGG TCGCAGCGGC
GGCGGCGCCG ACCAGGCCGC GAACTCCACG ACGCAGCTGA GCACTTCCGG ACCGGCCTCT
TCGGCGCAGA GCCTGCCGAC TCCCTCCTCA TTCGCGACAT CGGCGACCAC GTCCACGCGA
CCGCCGCCGG CAAGCACGAC CGCGAGCACA CCGACCACCA GCAAGAGCAA GAGCGCCAGC
ACGAGCACGA CTGTCGGCGC CAGCGCGGCG AAGCCGACCA CGACCAACCC CGCCTCCGTC
ACCCGCCCCG CCGGCGGACA CCTGATCACC GTCGTCAACG CCGACAACCA GACCATCTGG
GCGGCGACGA ACCCCAACGC CCAACACCCG ATCCCGCTGA CCGGCTGGCG CCTCGACCCC
GGCCAGAGCG TCACGTTCGC GGTCCCGGCA GGCTGGGGCG GTCGGGTCTG GGGACGTACC
GGCTGCTCCT TCTCCGCCTC CGGCGCCGGC CACTGCCTGA GCGGCGACTG CGGCGGCGTG
TTCCAGTGCA AGGGCGCGGG CGCCCCGCCG GCGACCCTCG CCGAGCTGAC GCTGGACTCG
TTCGACGGTC TGGACTTCTA CGACGTCAGC CTCGTCGACG GATCGAACCT GCCGATGTAC
ATCAACACCA GCCACCGCGT CGGCACCGAT CCGGTCTCGC AGAACGGCTG CTATCAGGGT
GCGTGCACCA AGCCGATCGT CTGCCCGGGT CCCATGCAGG TGAAGGCCGC CGGTCAGGTC
GTGGCGTGCA CGACCCCCTG CGCGGCTTTC GGCGGCGACG CCTACTGCTG CCGGGGTCAG
TGGGCAGGCC GCGAGAACTG CGACCCCGCG AAGTGGCCGG TGGACTACGC CAAGCTGGTC
TATAAGGACG CTGAGCCGTA CGCGTACTCC TACGCCTTCG ACGACTCCGC GACCATGTCC
TGCAAGGGCG ACTGCGACTA CCGCATCGTG TTCGGCACCA GCTCCAGCAA ATAG
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| Protein sequence | MTGHRSGRRA YRPIVAGGLA AAAALALVLW IAGFGSGRSG GGADQAANST TQLSTSGPAS
SAQSLPTPSS FATSATTSTR PPPASTTAST PTTSKSKSAS TSTTVGASAA KPTTTNPASV
TRPAGGHLIT VVNADNQTIW AATNPNAQHP IPLTGWRLDP GQSVTFAVPA GWGGRVWGRT
GCSFSASGAG HCLSGDCGGV FQCKGAGAPP ATLAELTLDS FDGLDFYDVS LVDGSNLPMY
INTSHRVGTD PVSQNGCYQG ACTKPIVCPG PMQVKAAGQV VACTTPCAAF GGDAYCCRGQ
WAGRENCDPA KWPVDYAKLV YKDAEPYAYS YAFDDSATMS CKGDCDYRIV FGTSSSK
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