| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2528 |
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| Symbol | |
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| ID | 8333877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2858171 |
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| End bp | 2860135 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644955681 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003113287 |
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| Protein GI | 256391723 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.97811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.381441 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGCAC CGCGGGGCGG ATTCGACGTC GCCACCGTGC GGGCGGCGCA GCGGGGTGAC
CAGACCGCGC TGCGCGATCT GCTCGCTGAG GCACTGCCGC TGGTCTACAA CATCGTCGGC
TTCGCGCTGC ATGCGCACGC CGATGTCGAT GACGCCGTTC AGGAGACCAT GGTGCGCGCC
GTTCGCGGAT TGCGCGATGT GCGCGATCCC GGGGCGTTCC GCTCCTGGCT GGTCGCCGTC
GCGATTCGGC AGATCCACGA TCACCAGCGG GCTTCGCGTG CGGTGCAGGA CCGGACCATG
CCGCTGGACG AGGCCTTCGC GGTCGCGGAT CCGGCTGCGG ACTTCGCCGA CGTGACCGCC
CTGCGGCTGG ATCTGACCGG GCAGCGCCGG GAGGTCGCCG AGGCCGCGAC GTGGCTGGAC
GACGGCAACC GGGAGCTGCT GGGCCTGTGG TGGATGACCG AGCAGGGCCG GCTGGACCGC
GCCGAGCTCG CCGAAGCCCT GGGCGTGCCG CAAAACCAGG CCGCCGTGCG GATCCAGCGG
CTCAAGCAGC AGCTGTCGGC GACGCGCGTC GTCGTGCGCG CGCTGCGGGC GCCGGAGCGC
TGCCGGGGTC TGTCGGATCT CACCAGCAGG TGGGACGGTC ACCGCAACGC GTTGTGGCGC
AAGCGGTTCG TCGGCCACAC CCGGGACTGC GAGATCTGCG ACGGCAGGTC GCACGACCTC
GTCCCGGTCG AGAAGTTGTT GGCCGGACTG CCGTTGGCGG TGGTCCCGAC AGCGCTCGCC
GCTGCCGTGT TCAAGGCGGC GACCGCGGCG AGTGCCGGGG GCGGGGGAGG TGCGGCTGGG
ATCGCTCACG GTTCCCACGG CGCCTCCTCG CTCGGCCATG GCTCCTCGCT CGGCCACAGC
TCCGCCAAAC TGTTGGGCTT CCTGCCCGCC AAGGTTCCAG CCGTGATCGC AGCAGTCGCC
GCGGCGAGCG CCGTCGGAGT GGCAGCCACC GCGGTCTGGG CCAACTCGCA GACCTCCGGC
GCCCTCCCGG CTCCGACGCC GATCGCGTCC AGCACCTCGA CGAGCTCCCC GAACGCGGTC
GCCGCCGCGA GCCCGCCGCC GACCTCGACC ACGCCACCGA CCACACCGTC TCCCAAGCCC
TCGACCCCGG TCCCGTCCTC GAAACCGACG TCGCCCTCCG CGCACCCGAC CCCGACCAAA
ACCGTCGCCC CGCCTCCGCG TCCCGGCGTC TCCGGACCGA AGAAGGGCGT CGCAGCTTGG
AGCGCCCCCG GCTTCGACTC GGCGCTGACC AGTTCCAAGG CGTCCTGGTA CTACGACTGG
TCGCCGAGCC GCATGGACCA GCTCGGCAAA GCCGGTCCGG AGTTCGTCCC GATGATCTGG
GGCGCGAAGA ACGCCGACTC CACGACGCTG GCCACCGCGC GCTCGGCAGG CACGACCCTG
CTCGGATTCA ACGAGCCCGA CATGGGCTCG CAGTCCAACA TGACCGTCGC GCAGGCGCTG
GACCTGTGGC CCAAGCTCCA AGCCACCGGC CTGCGCCTGG GCAGCCCGGC GGTCGCCGCC
AACGCCGCGA CCCCCGGCGG CTGGCTCGAC CAGTTCATGG CCGGTGCGGC GGCGCGCGGC
TACCGCGTCG ACTTCATCAC CGTGCACTGG TACGGCTCGG ACTTCCGCCC GGGACCGGCC
GTCGATCAGC TGCGGTCCTA TCTGCAAGCC ATCCACGACC GCTACCACCT GCCGATCTGG
GTCACCGAGT ACGCGCTCAT CTCCTTCTCC GGCGGCAGCC AATACCCGGC TCCGGACCAG
CAGGCAGCCT TCGTGACCCA GTCCGCGGCG ATGCTCGACT CGCTGCCCTA CGTCGAGCGC
TACGCGTGGT TCGGCTTGGC GGCGTCCTCC GGGTCCTCGA CGGGGACGGC GCTGTTCCAG
AACGGCGCGG CGACACCGAT GGGGGTGGCT TATGAAGCAT CCTGA
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| Protein sequence | MRAPRGGFDV ATVRAAQRGD QTALRDLLAE ALPLVYNIVG FALHAHADVD DAVQETMVRA
VRGLRDVRDP GAFRSWLVAV AIRQIHDHQR ASRAVQDRTM PLDEAFAVAD PAADFADVTA
LRLDLTGQRR EVAEAATWLD DGNRELLGLW WMTEQGRLDR AELAEALGVP QNQAAVRIQR
LKQQLSATRV VVRALRAPER CRGLSDLTSR WDGHRNALWR KRFVGHTRDC EICDGRSHDL
VPVEKLLAGL PLAVVPTALA AAVFKAATAA SAGGGGGAAG IAHGSHGASS LGHGSSLGHS
SAKLLGFLPA KVPAVIAAVA AASAVGVAAT AVWANSQTSG ALPAPTPIAS STSTSSPNAV
AAASPPPTST TPPTTPSPKP STPVPSSKPT SPSAHPTPTK TVAPPPRPGV SGPKKGVAAW
SAPGFDSALT SSKASWYYDW SPSRMDQLGK AGPEFVPMIW GAKNADSTTL ATARSAGTTL
LGFNEPDMGS QSNMTVAQAL DLWPKLQATG LRLGSPAVAA NAATPGGWLD QFMAGAAARG
YRVDFITVHW YGSDFRPGPA VDQLRSYLQA IHDRYHLPIW VTEYALISFS GGSQYPAPDQ
QAAFVTQSAA MLDSLPYVER YAWFGLAASS GSSTGTALFQ NGAATPMGVA YEAS
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