| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2526 |
|---|
| Symbol | |
|---|
| ID | 8333875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 2856524 |
|---|
| End bp | 2857120 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644955679 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003113285 |
|---|
| Protein GI | 256391721 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.195305 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.396303 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCC CGCGCTCTGA GGCTCGGCAG GCTCGGCTCG TCGCGCCGGA GCGCGCGGCG
GCGCCCGAGG CGCCGCGGGT CCTGTCCAGC GCGGCGTATC CGGGCTGGGA GGCGATCTAC
GCCGACAACG TCGAGCGGAT CTACCGGCTC ATGTACGCCA AGGTCGGCAA CCGCCACGAC
GCCGAGGACC TGACCTCCCA GGTGTTCCTG ACCGCCTTCG GCCCGCTGCG CGCCACCGCC
AGCGTCGGCG AGGTGCGCGC CTACCTGCTC GCCACGGCGC GCACCGTGCT CGCCACCCAC
TGGCGCTCCA CGCTCGGCCA CCAGGTCACC GTGATCGACG TCGACGAGGC CGGCCTGGAA
GACTTCTCCG CACCGGCCCA GGAGGAGCGG ACCGGCCGGA CCGACGAGCG GATCGGGGCG
ATCCTGGCGG GACTGCCGGA CCGGCACCGC GCGATCCTGA CCCTGCGCTT CCTGCGGGGC
TACTCGATCA AGGCGGCCGC CGCCGAGCTG GGAGTGTCGG TGGCGAACGC CAAAGTGCTG
CAACACCGCG CCCTGCGCCG AGCCGCAGGA CTCGACAAGG AAGGGGAAGC GTCATGA
|
|---|
| Protein sequence | MTSPRSEARQ ARLVAPERAA APEAPRVLSS AAYPGWEAIY ADNVERIYRL MYAKVGNRHD
AEDLTSQVFL TAFGPLRATA SVGEVRAYLL ATARTVLATH WRSTLGHQVT VIDVDEAGLE
DFSAPAQEER TGRTDERIGA ILAGLPDRHR AILTLRFLRG YSIKAAAAEL GVSVANAKVL
QHRALRRAAG LDKEGEAS
|
|---|
| |