| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2518 |
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| Symbol | |
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| ID | 8333867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 2849443 |
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| End bp | 2850525 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644955671 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_003113277 |
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| Protein GI | 256391713 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02960] RNA polymerase sigma-70 factor, TIGR02960 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.327804 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGACG CTGCCACCTT CGCCACCGAG ACAGAACCGT ATCGGCGGGA GCTGTTCGCT
CACTGCTACC GCATGCTCGG ATCCGTCCTC GATGCCGAGG ATCTCGTTCA GGAGACCTAT
CTGCGGGCGT GGCGTCACTA CGACAAGTTC GAGGGACGTT CGTCGGTGCG TACCTGGCTC
TACCAGATCG CCACCAACGG ATGCCTGACG GCGTTGGCCA AGCGGCGTGA TGCCGAGCGT
CGGGTCCTGC CCTCCGGGCT GGGCCCGCCA GAGGACAACA CCGAGGCAGC GGTGTTGGAA
CCCGACCGGC GTGTGCGGTG GGTTCAGCCG GTCCCGGACG CGCTCATCGC GCCTGAGTCC
GGTGATCCGG CAGCAGTGGT TGCCGCGCGG GAGGGAGTGC GGCTGGCGCT GGTCGCCAGT
TTGCAGCACC TTCCCGCGCG GCAGCGCGCT GTGCTGGTCC TGCGCGAGGT GTTGGCACTG
CCGGCCAGCG AGGTGGCCGA GATCCTGCAG ACCTCGACGG CGTCGGTGAA GAGCGCGCTG
CAACGGGCGC GGGCGACGCT GCGGGAGCAG GCGCCGGCCG AGGACCGGAT CAGCGAACCG
AAGGCGCCGC AGGCCCGGGC AGTGCTCGAG CGCTACATCA AGGCGTTCGA GAACGCCGAC
GCCGACGCGT TGCAGCAGCT GCTGGTCCAG GACGCCACGA TCGAGGCACC GCCGATGCGC
GCATGGTTCC AGGGAGTCCA GAAGTGCGTG CCGGTCCTGC GGCACGTAAT GGGCGAGCCG
GGGCAGTGGC GCATGCTTCC CATCACCGGA GGCGCGAACG GCTCTCCGGC GGCTGCGGGA
TACCTGCGCG ACGAGGACGG CCGGTATCGG CCGTACGGGG TCGTCGTGCT CGACGTCGTG
GGCGATCGCA TCGCGCGCAT CACCTCCTTC GGCGATCCGG CGCTGCTTCC GGTCTTCGGC
TTCGAGAACG CGCCGATCGG GGCTGACGCA GAGGTGCGGT TGGTTTGTGG GTATTTAGAA
GCTTTTTACG TCTTCGAGCA TGGTTTGATG GCCTCGCAGG GGGCGCAGTT CGGTGGTGCG
TAG
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| Protein sequence | MADAATFATE TEPYRRELFA HCYRMLGSVL DAEDLVQETY LRAWRHYDKF EGRSSVRTWL
YQIATNGCLT ALAKRRDAER RVLPSGLGPP EDNTEAAVLE PDRRVRWVQP VPDALIAPES
GDPAAVVAAR EGVRLALVAS LQHLPARQRA VLVLREVLAL PASEVAEILQ TSTASVKSAL
QRARATLREQ APAEDRISEP KAPQARAVLE RYIKAFENAD ADALQQLLVQ DATIEAPPMR
AWFQGVQKCV PVLRHVMGEP GQWRMLPITG GANGSPAAAG YLRDEDGRYR PYGVVVLDVV
GDRIARITSF GDPALLPVFG FENAPIGADA EVRLVCGYLE AFYVFEHGLM ASQGAQFGGA
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