| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2514 |
|---|
| Symbol | |
|---|
| ID | 8333863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 2843915 |
|---|
| End bp | 2844886 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644955667 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003113273 |
|---|
| Protein GI | 256391709 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0635033 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGTACT TCCTGCGCCG CCTGGGCTTC TACCTGTTCA CGCTCTGGGC GGCCATCACC
ATCAACTTCT TCATCCCGCG GATGATCCCC GGCAACGCCG TGGACTCCCT GCTCGCGCAG
CGCCGCGGCG AGGTCGACAG CCAGGCCGTG CAGTCCCTGA ACATCCTGTT CGGCCTGGAC
AAGCACCAGA GCCTGGCCTC GCAGTACTGG CACTACCTGG TCCAGCTCTC CCACGGCGAC
CTGGGCATCA GCTTCGGCAA CTTCCCCGAG CCGGTGACCA CGGTCCTGGG CTCGGCGCTG
CCCTGGACGC TCGGGCTGAT CGGCACCACC ACGATCCTGG CCTTCCTGAT CGGGACCGGG
CTGGGGGTGT TCGCCGGCTG GAAGCGCGGG ACGTGGGTGG ACGGTCTGCT GCCGGCGACC
TCGTTCCTGT CCTCGATCCC CTACTTCTGG CTCGGGCTGA TCTGCGTGGC CTGGCTCGCC
AGCCCGCTCG GCCTGCCGAC CTCCGGCGGC TACACCGTCG GCAACGTCCC CGGCTGGAAC
ATCGCCGGCG ACATCCTGAA CCACATGATC CTGCCCGCCC TGACCATCAT CGTCACCTCG
ATCGGCGGCT GGCTGCTGTC GATGCGGAAC ATGATGGTCA CGGTCACCGC CGAGGACTAC
ATCACCGTGG CGCACGCCAA GGGCCTGTCC GGGACGCGCG TGATGACCAA GTACGCGGCG
CGCAACGCGC TGCTGCCCTC GGTCTCCGGC TTCGGCATGG CGCTGGGCCT GGTGGTCGGC
GGCACGTTCC TGGTGGAGCA GGTCTTCTCC CTGCCCGGCG TCGGGCTCCA GCTCATCAAC
GCCATCTCAG GGCACGACTA CCCGTTGATC CAGGGCGTCT TCCTGGTGGT GACGGTCGCG
GTGCTGGCCG CGAACTTCCT GGCCGACCTG GCCTACATGG CGCTCGACCC GCGTACCCGG
AAGGAGGGAT GA
|
|---|
| Protein sequence | MRYFLRRLGF YLFTLWAAIT INFFIPRMIP GNAVDSLLAQ RRGEVDSQAV QSLNILFGLD
KHQSLASQYW HYLVQLSHGD LGISFGNFPE PVTTVLGSAL PWTLGLIGTT TILAFLIGTG
LGVFAGWKRG TWVDGLLPAT SFLSSIPYFW LGLICVAWLA SPLGLPTSGG YTVGNVPGWN
IAGDILNHMI LPALTIIVTS IGGWLLSMRN MMVTVTAEDY ITVAHAKGLS GTRVMTKYAA
RNALLPSVSG FGMALGLVVG GTFLVEQVFS LPGVGLQLIN AISGHDYPLI QGVFLVVTVA
VLAANFLADL AYMALDPRTR KEG
|
|---|
| |