| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2509 |
|---|
| Symbol | |
|---|
| ID | 8333858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 2837227 |
|---|
| End bp | 2838777 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644955662 |
|---|
| Product | protein of unknown function DUF1023 |
|---|
| Protein accession | YP_003113268 |
|---|
| Protein GI | 256391704 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0670827 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGACAGA ACTCCCTGAT CCGTGGGTAC TTCTCCCCTC GCACCGCCGC TTCGGCGCCC
GTCATGCTGT GCCGGACAGC ACCGGAATCG GATGAGGGGG ACGGCGTCGT GGCCGACACA
GGCGCTTTCA GCATCGACCT GCCGCTGATG AGTACGGTCA CCGCGGACTT GGAGAGTCTG
GTCTCCAGCG GCGGCAGCGC GCTGAGCGAG TTGGGGTCGC TGGCGGTGGG TGCGGCGATC
TTCGGTGAGA TCGGGTCGAT GGTCGGGTCG GTCAACGGGC AGCTGCACGA GAACCTTGTC
AGTTCCCTGA CGTCCGGGCT GGGGTTGTTC GGGACGCTGA ACGGCGCGGT GCAGTGCTGC
GCCAGCGACT ACGCCTCCCT GGACACGATG GTCTCGGACA GCTTCGGGAG TCTGGGCCTC
GGCGGGTCGC TGCCCTCGAC GCCGGTCGCC GGGACCAGTC CGGCGGACGT GAACAAGTGG
TGGACCGGGC TCAGCAGCGA TCAGCGGGCG GCGTTGGTGG CCAGTGAGCC GGCGAAGATC
GGGGCGTTGG ACGGCGTGCC CGACACCGTG CGCGACTCCG CGAACCGGAC TGTCCTGTCG
AACCTGCAAA AGCAGACCCA GCAGCAGATC ACCGATCTGA AGAACACGCA GACCCTGCCC
TTCGCCGACG ACCCGATGGT CGCGGCGATG CAGCAGAAGC AGATCACCGA GCTGCAGGGC
AAGCTCGACG GGATGAACGA GGTGCAGAAG GTGCTCGCCA ACGGCGGGAC CAACGGCACG
CCGCAGAAGT ACCTGCTGGA GGTCGACACC AACGGGGTCG GGCACTCGAT CATCGCCAGC
GGCAACCCGG ACACCGCCGA CAACGTCGTG ACCGTCGTCC CCGGCGTGAG CACCGATCTG
TCGGTCGGCA GCGTCGATGC CTACACCAAG GGCGCCGACG CCATCGTGGC CTCCGCGCAC
AACGCCGACC CGGCCCAGAC CACCTCGGCG GTCGCGTGGA TGGACTACAA CGCCCCGGCG
ACCGTCCCCG GCGCGCTGTT CTCCGGGCCC GCGCACGCCG GCGGACCGGT CCTGGACAAC
TTCCAGCAGG GTCTGTACGC CACCCACGAC CCGAGCGATC CGCTGCACAC CACGGTGATC
GGCCACAGCT ACGGCACCAC CGTGGTCGGC GAGGCCACCC AGGCGCCCGG CGGCCTGCGC
GCCGACGACG TGGTCCTGGC CGCGAGCCCG GGCATCAACG TGGACAACGC CGCGGCGATG
AACGTCCCCG GCGGCACCGC GCACGTCTGG GCCACCCGCG ACGACAACGA CCCGATCGTC
TGGGCCGAGG GCTTCCACGA CACCGACCCG GTGACCCCGG CCTTCGGCGC GCACGTCTTC
AACGGCGGCG TCGGCCCGAG CGGCCTGGTG GCCGCGCACG ACTACTACTT CGACCCCACC
TCGCCGGCGA TGGCGAACTT CGGGCAGATC GCCACCGGCC ACTACAACCA GGTGACCTCG
CCCCCGCCGG TCAAGCCGGA CCCGTCGTGG TCGTACCCGA TGTTCGAGTA G
|
|---|
| Protein sequence | MGQNSLIRGY FSPRTAASAP VMLCRTAPES DEGDGVVADT GAFSIDLPLM STVTADLESL
VSSGGSALSE LGSLAVGAAI FGEIGSMVGS VNGQLHENLV SSLTSGLGLF GTLNGAVQCC
ASDYASLDTM VSDSFGSLGL GGSLPSTPVA GTSPADVNKW WTGLSSDQRA ALVASEPAKI
GALDGVPDTV RDSANRTVLS NLQKQTQQQI TDLKNTQTLP FADDPMVAAM QQKQITELQG
KLDGMNEVQK VLANGGTNGT PQKYLLEVDT NGVGHSIIAS GNPDTADNVV TVVPGVSTDL
SVGSVDAYTK GADAIVASAH NADPAQTTSA VAWMDYNAPA TVPGALFSGP AHAGGPVLDN
FQQGLYATHD PSDPLHTTVI GHSYGTTVVG EATQAPGGLR ADDVVLAASP GINVDNAAAM
NVPGGTAHVW ATRDDNDPIV WAEGFHDTDP VTPAFGAHVF NGGVGPSGLV AAHDYYFDPT
SPAMANFGQI ATGHYNQVTS PPPVKPDPSW SYPMFE
|
|---|
| |