Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2503 |
Symbol | |
ID | 8333852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2830224 |
End bp | 2830895 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644955656 |
Product | hypothetical protein |
Protein accession | YP_003113262 |
Protein GI | 256391698 |
COG category | [S] Function unknown |
COG ID | [COG5587] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02453] conserved hypothetical protein TIGR02453 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0772391 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACGC GGTTCGCGGG ATTCACCGAC GAGGCCTTCG ACTTCTACCT CGGCCTCGCC GCCGACAACT CGAAGGAATA CTGGACCGAC CACAAGCACG TGTACGAGCA GGCCGTCCGC GAACCCATGC AAGCACTCCT CGACCAACTG GCACCGGCCT TCAACGCCAA GCCAAGCATG TTCCGCCCCC ACCGCGACAT CCGCTTCAGC CACGACAAGT CCCCCTACAA GACCCGCCAA GGCGCCCTCC TGAACATCGC CCCCGGCGTC GGCTACTACC TCTCCCTCGA CGCCGACGGC CTCTACGTAG GCGGCGGCTT CCACCCCCAC CACCGCGAGC AGACAACCCG CTTCCGCGCC GCCATCGACC AACCCGCCAC CGGCACGGAG ATCGAGGCGA TCGTCGCCAA GCTAGAGAAG CGCGGCTTCG AAATCAGCGG CGCCCAAGTC CGCACCCGCC CCCGCGGCGT CCCGGCAGAC CATCCGCGCC TGGACCTGAT GCGCCGCGAG TACGTGACCG CCAGCCGATC GGTGGCGCCG TCGGAGGCCG CCGGCTCGGG CTTCGCGACC GCGGTGAAGA AGGACTGGCA GGCGATCACG CCACTGGTCA GCTGGATCAT GGCCAATGCC GCGCCGAGCA CCGAGGAATC TGAGGGAACC GAGAAGTTCT AG
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Protein sequence | MTTRFAGFTD EAFDFYLGLA ADNSKEYWTD HKHVYEQAVR EPMQALLDQL APAFNAKPSM FRPHRDIRFS HDKSPYKTRQ GALLNIAPGV GYYLSLDADG LYVGGGFHPH HREQTTRFRA AIDQPATGTE IEAIVAKLEK RGFEISGAQV RTRPRGVPAD HPRLDLMRRE YVTASRSVAP SEAAGSGFAT AVKKDWQAIT PLVSWIMANA APSTEESEGT EKF
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