Gene Caci_2503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2503 
Symbol 
ID8333852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2830224 
End bp2830895 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content67% 
IMG OID644955656 
Producthypothetical protein 
Protein accessionYP_003113262 
Protein GI256391698 
COG category[S] Function unknown 
COG ID[COG5587] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02453] conserved hypothetical protein TIGR02453 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0772391 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC GGTTCGCGGG ATTCACCGAC GAGGCCTTCG ACTTCTACCT CGGCCTCGCC 
GCCGACAACT CGAAGGAATA CTGGACCGAC CACAAGCACG TGTACGAGCA GGCCGTCCGC
GAACCCATGC AAGCACTCCT CGACCAACTG GCACCGGCCT TCAACGCCAA GCCAAGCATG
TTCCGCCCCC ACCGCGACAT CCGCTTCAGC CACGACAAGT CCCCCTACAA GACCCGCCAA
GGCGCCCTCC TGAACATCGC CCCCGGCGTC GGCTACTACC TCTCCCTCGA CGCCGACGGC
CTCTACGTAG GCGGCGGCTT CCACCCCCAC CACCGCGAGC AGACAACCCG CTTCCGCGCC
GCCATCGACC AACCCGCCAC CGGCACGGAG ATCGAGGCGA TCGTCGCCAA GCTAGAGAAG
CGCGGCTTCG AAATCAGCGG CGCCCAAGTC CGCACCCGCC CCCGCGGCGT CCCGGCAGAC
CATCCGCGCC TGGACCTGAT GCGCCGCGAG TACGTGACCG CCAGCCGATC GGTGGCGCCG
TCGGAGGCCG CCGGCTCGGG CTTCGCGACC GCGGTGAAGA AGGACTGGCA GGCGATCACG
CCACTGGTCA GCTGGATCAT GGCCAATGCC GCGCCGAGCA CCGAGGAATC TGAGGGAACC
GAGAAGTTCT AG
 
Protein sequence
MTTRFAGFTD EAFDFYLGLA ADNSKEYWTD HKHVYEQAVR EPMQALLDQL APAFNAKPSM 
FRPHRDIRFS HDKSPYKTRQ GALLNIAPGV GYYLSLDADG LYVGGGFHPH HREQTTRFRA
AIDQPATGTE IEAIVAKLEK RGFEISGAQV RTRPRGVPAD HPRLDLMRRE YVTASRSVAP
SEAAGSGFAT AVKKDWQAIT PLVSWIMANA APSTEESEGT EKF