| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2481 |
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| Symbol | |
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| ID | 8333830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2805141 |
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| End bp | 2807735 |
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| Gene Length | 2595 bp |
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| Protein Length | 864 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644955634 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_003113240 |
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| Protein GI | 256391676 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.896782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCACGCT ACGCGGAGTT CGGGATCGGA GAGTCCGACC CCGCTTCCGG GCTGCCCGGG
ATCGGCTCAG GCGGGGCGCC GACCGCGGTC GGGGGCTTGG TAGACGGCGA CACGCGACGC
GACTTCGAGG CCGCGGCAGC AGGCAGCGCT CCGACCCCCG AACCGCACCC GACCCCCGAC
GGCGCCCCGG ACGGCGCCAC GGTGCCGAAG CCGGCCGCCG GACGCGCCAC CTCGCACGAG
TCAGCCGCCG GCGATCCCGC AGCCTCGGCG AATCCGCCTT CTGCCGATCC CGCTGGGGCT
CCCGCGACCG GCTCCGAAGC CGATCACGCC CCGATCGCCG CCACCTGGTC CGAAGCGCAC
CCCTTACCCG ACCCCGATTC CCACCCCGAC CCCCGCCCCG ACCGCCCGGT CATAGCCGGC
CTCGTCGACC TCCGCTTCGC CACCACCACC GACCCGGCGG CGCGCGAAGC CGCCGCTTTG
TCCGAGGCGG CCGACCTGCC TCCGGCCGCG CCGCCGGCCG CCGCGCTCGA CGGCACTCCC
ACCGATGCCT TCGCGCGGGC CTGGGCCGTC GCGCTGTCGG CCGCCGCGGC CACGCCGCTG
GGCTTCGACC ACGCGCTGCG GGTCGTCACA CCGCTGGCCG AGCAGGTCGT CGCCGCGCCG
GACGATCCGG AGCTGGCGCG CAAGATCGGT GTGACCGCGG CCGGCGCGCT GATCGACGCG
CACTGCTTCC AGGGCGCCTG CGTCGCCACC TCCATCGAGG TCGTCGACCG CCATCTGCCG
CCCTACCTGC GTCCGGAGAC CCGCTCCGCG CTGCGTGCCG GGCTGGCTTC GGCCTTCGCC
GAGGGACTGC GCGAGCGCAC GCGCGCCGAG CAGTCGTCGA TCCACGAGGC CGTGCTCACC
GCCTACCGGG CCGGCGAGGC GCGCTTCCGT ACCGTGTTCC GCAACGCCGC CCTCGGCATC
GTCATCACCG ACAAGCACGG CCAGGTGCTG GAGGTGAACC CGGCGCTGGC CGAGATGCTC
GGCGTCGACG CCTACGCCGC GCGCGGCCGC ACCATCAGGA ACCTGATCGA CCCGACCGAG
CCCGGCGAGT ACTGGCGCGG CTACAACGCC CTGCTGGCCG GGGAGCAGAC CGAGGCCGAG
GCCGACACCC GCATCCGGCG CCTCGACGGC GGCGTGGTCT GGACGCACGT GCGCACCACC
GCCGTCCGCG ACGACAGCGG CGACGTCGCC CTGGTCATAG CGCTGCACGA AGACGTCACC
GAACGCCGCC GCGCCACCGA CCAGCTGCGC CACCAGGCCA CCCACGACGC CCTGACCGGC
CTGCCCAACC GCGTCCGGCT GCTCGACGCG GTCGAGGAAC TGCTGCGCAG CGCCGGCCCG
GAGGACCGCC TCGGCCTGTG CTTCCTGGAC CTCGACGGCT TCAAGGGCGT CAACGACACC
CTCGGCCACC AGGCGGGCGA CGAGCTCCTG ACCGAGATCG CGCACCGCCT CTCCGCCGCC
ACCGACCCCC GCCGCCACGT CGTGGCCCGC ATGGGCGGCG ACGAGTTCGT GATCCTGTTC
CGTCGCACCC AGGGCGCGCA GTCGGTGTTC CCGGTCATCG AGAAGGTCCT GGACGCCGTC
CGCCAGCCGG TCCTGCTCGA CGGCCACAGC GTCACCGTCA CCGCCAGCGC CGGCCTGGTC
GAACGCCCCG CCGCCGCGGC CTCGGCGACC GAACTGCTGC GCGCCGCCGA CATCACGCTC
TACTGGGCCA AGTCCGCCGG CAAGGCCGAC TTCGCGCTCT TCGACGAGGA CCGCAACGCC
CGCGAGGTCC ACCGCTACGC CCTGGCGCAG GCGCTCCCGG CAGCCCTGGA CTCCGGCGAG
ATGTTCCTGG ACTACCAGCC GATCGTGGAC CTGGCCGGCG GCCGCCCGCC GATGGTCGAG
GCGCTGGTCC GCTGGCGCCA CCCCGAGCGC GGACTGCTCA AGCCCGAGGA GTTCATCCCC
GTCGCCGAGG AGACCGGCGC CATCGTCGAG CTCGGCCGCT GGGTCCTGGA CCGCGCCGTC
CGCGACGCCG CGGCCTGGCC CGACGGCCCG GCGGTCGCCG TGAACGTCGC GGTCCGCCAG
GTGCACGACT ACGGCCTGGT CCGCGAGGTC GCCACCGCAC TCGAGGTCTC CGGCCTGCCG
CCCCGCCGCC TGTGCCTGGA GATCACCGAA ACCGCCCTGA TGGACACCGA GGAGGACGGC
CTCCCCGGAC CCGGCACCCT GCGCACCCTC GCCGACATGG GCATCGGCAT AGCCGTCGAC
GACTTCGGCA CCGGCTACTC CAACCTCGCC CGCCTCCGCG ACCTGCCGGC CACCTCCCTG
AAGATCGACG CCTCCTTCGT CGCCGACCTC GGCCACCCCG ACGCCGGCGA CTTCGCCGAA
TCAGTCATCA TCAGCCTCGT GGCCCTGGCC CACGCCGCCG GTATGACCGT CACCGCCGAG
GGCATCGAGA CCGCCGACCA AGCACGCCGC CTGACCACGC TCGGTGTCGA CTACGGCCAG
GGCTTCCACT ACTCGCGACC GGTGTCCGCC GAGCGGATAG AAGCGGTGAT GGCAGAGCTC
GGCGCCCAGA AGTAA
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| Protein sequence | MARYAEFGIG ESDPASGLPG IGSGGAPTAV GGLVDGDTRR DFEAAAAGSA PTPEPHPTPD
GAPDGATVPK PAAGRATSHE SAAGDPAASA NPPSADPAGA PATGSEADHA PIAATWSEAH
PLPDPDSHPD PRPDRPVIAG LVDLRFATTT DPAAREAAAL SEAADLPPAA PPAAALDGTP
TDAFARAWAV ALSAAAATPL GFDHALRVVT PLAEQVVAAP DDPELARKIG VTAAGALIDA
HCFQGACVAT SIEVVDRHLP PYLRPETRSA LRAGLASAFA EGLRERTRAE QSSIHEAVLT
AYRAGEARFR TVFRNAALGI VITDKHGQVL EVNPALAEML GVDAYAARGR TIRNLIDPTE
PGEYWRGYNA LLAGEQTEAE ADTRIRRLDG GVVWTHVRTT AVRDDSGDVA LVIALHEDVT
ERRRATDQLR HQATHDALTG LPNRVRLLDA VEELLRSAGP EDRLGLCFLD LDGFKGVNDT
LGHQAGDELL TEIAHRLSAA TDPRRHVVAR MGGDEFVILF RRTQGAQSVF PVIEKVLDAV
RQPVLLDGHS VTVTASAGLV ERPAAAASAT ELLRAADITL YWAKSAGKAD FALFDEDRNA
REVHRYALAQ ALPAALDSGE MFLDYQPIVD LAGGRPPMVE ALVRWRHPER GLLKPEEFIP
VAEETGAIVE LGRWVLDRAV RDAAAWPDGP AVAVNVAVRQ VHDYGLVREV ATALEVSGLP
PRRLCLEITE TALMDTEEDG LPGPGTLRTL ADMGIGIAVD DFGTGYSNLA RLRDLPATSL
KIDASFVADL GHPDAGDFAE SVIISLVALA HAAGMTVTAE GIETADQARR LTTLGVDYGQ
GFHYSRPVSA ERIEAVMAEL GAQK
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