| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2479 |
|---|
| Symbol | |
|---|
| ID | 8333828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 2802730 |
|---|
| End bp | 2804133 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644955632 |
|---|
| Product | dihydrolipoamide dehydrogenase |
|---|
| Protein accession | YP_003113238 |
|---|
| Protein GI | 256391674 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGC ATTTCGATGT CGTCGTCCTG GGCGCGGGGC CCGGCGGGTA CACAGCGGCG
GTCCGCGCGA CGCAGCTGGG CAAGACTGTC GCTGTTGTGG AGGAGCGCTA CTGGGGCGGG
GTGTGCCTCA ACGTCGGGTG CATCCCCTCC AAGGCGCTCC TGCGCAACGC GGAGCTGGCG
CACACCGTGC AGCACGAGGC GAAGATCTAC GGGATCTCCT CCAACGGCCC GATCACCTTC
GACTACGGCG CCGCCTACGA GCGCAGCCGC CAGGTCGCCG ACGGCCGCGT CAAGGGTGTC
CACTACCTGA TGCGCAAGAA CAAGATCGCG GAGTACGACG GCCGCGGCAC GTTCCTGGAC
CAGAACACCC TCAGCGTCGC GAAGTCCGAC GGGACCAGCG AGACCCTCAC CTTCGACCAC
TGCGTCATCG CCACCGGCGC GCGCACCCGG CTGCTGCCGG GCACTCAGCT CTCCGAGCGC
GTGGTCACCT ATGAAGAGCA GATCCTGTCC GCCACGCTGC CGGAGAGCAT CGTGATCGCC
GGCGCCGGAG CGATCGGCGT GGAGTTCGGT TACGTGCTCA ACAGCTACGG CGTGAAGGTC
ACCATCGTCG AGTTCCTGGA GCGCATGGTC CCGCTGGAGG ACGCCGAGGT CTCCAAGGAG
CTGGCCCGCC AGTACCGCAA GCTCGGCGTC GACGTGCTCA CCGGGACCCG GGTGGAGACC
ATCGACGACT CCGGTCCCAA GGTCCGGGTC ACGGTCAGCG GCAAGGACGG CGCGCAGCAG
GTGCTGGAGG CCGACAAGGT GCTGCAGGCG ATCGGCTTCT CGCCGAACGT CGACGGCTAC
GGCCTGGACA AGACCGGCGT GGCGCTCACC GAGCGCGGCG CGATCGCCGT GGACGGGCGC
GGGCGCACCA ACGTCGCGCA CATCTTCGCC ATCGGCGACG TCACCGCCAA GGTGATGCTC
GCGCACGTCG CCGAGACCCA GGCGATGGTC GCCGCCGAGA CCATCGCCGG CGCGGAGACG
ATGGAGATCG ACTTCGTGAT GGTGCCGCGC GCCACCTACT GCCAGCCGCA GATCGCCAGC
TTCGGCTGGA CCGAGGAGCA GGCGCGCCTG GAGGGCTTCG ACGTCAAGAT CGCCAAGTTC
CCGTTCAGCG CCAACGGCAA GGCCGCGGGC CTGGGCGACG CGGTCGGCTT CGTGAAGGTG
ATCAGCGACG CCAAGTACGG CGAGCTGCTA GGCGCGCACC TCATCGGCCC TGAGGTGACC
GAGCTCCTGC CCGAGCTGAC CCTGGCTCAG CAGTGGGACC TGACGGTCCA CGAGGTGGGC
CGTAACATCC ATGCCCACCC GACGCTCGGC GAGGCTGTGA AGGAAGCAGT CCACGGGCTT
GCCGGACATA TGATTAACAT GTAG
|
|---|
| Protein sequence | MSTHFDVVVL GAGPGGYTAA VRATQLGKTV AVVEERYWGG VCLNVGCIPS KALLRNAELA
HTVQHEAKIY GISSNGPITF DYGAAYERSR QVADGRVKGV HYLMRKNKIA EYDGRGTFLD
QNTLSVAKSD GTSETLTFDH CVIATGARTR LLPGTQLSER VVTYEEQILS ATLPESIVIA
GAGAIGVEFG YVLNSYGVKV TIVEFLERMV PLEDAEVSKE LARQYRKLGV DVLTGTRVET
IDDSGPKVRV TVSGKDGAQQ VLEADKVLQA IGFSPNVDGY GLDKTGVALT ERGAIAVDGR
GRTNVAHIFA IGDVTAKVML AHVAETQAMV AAETIAGAET MEIDFVMVPR ATYCQPQIAS
FGWTEEQARL EGFDVKIAKF PFSANGKAAG LGDAVGFVKV ISDAKYGELL GAHLIGPEVT
ELLPELTLAQ QWDLTVHEVG RNIHAHPTLG EAVKEAVHGL AGHMINM
|
|---|
| |