Gene Caci_2465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2465 
Symbol 
ID8333814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2788071 
End bp2789357 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content71% 
IMG OID644955618 
Productprotein of unknown function DUF445 
Protein accessionYP_003113224 
Protein GI256391660 
COG category[S] Function unknown 
COG ID[COG2733] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCG TGACGAAAGC CCGGCCCAGT GACCCGCTGA CCCCCAGCGA ACTGCAGAAG 
CGGAGCGGGA TGCGCCGCAT GAAGTCGGTC GCGACCGGGT TCTTGTTGGC CGCCGCGATC
GTCTACATCA CCATGCGGAT CCTGCAGAAC CACGGCGTCC ACGGCTGGAC CGGCTACGTC
GAGGCCGCCG CCGAGGCCGG CATGGTCGGC GGGCTGGCGG ACTGGTTCGC GGTCACCGCG
CTGTTCAAGC ACCCGCTCGG CGTGCCGATC CCGCACACCG CGATCATCCC CAACCGCAAG
GACCAGTTCG GCGAAGGGCT GGGCACCTTC GTCGGCGAGA ACTTCCTGTC CGAGGACGTC
ATCCGCAGCC GCCTTTCCGC CCTCGGCATC TCCCGCCGCA CCGGGCAGTG GCTCTCGCAG
CCGGAGAACG CCGCGCGCGT CACCAAGGAG CTGGCGACCG CCGTGCGCGG GGTGCTGACC
GTGCTGCGCG ACGAGGACAT CCAGAAGATC CTCGGCGACG CGGTCGCCGT CCGGCTGGCC
AAGGCCGACC TGGCGACGCC GCTGGGCAAC GTGCTCCAGC GCCTCACCGA GTCCGGCAAC
CACCACCAGG TGGTCGACAT GGTGGCGGCG CGCGCCCACG ACTGGCTGGA GGCGCACCCC
GAGGCCATCG GCAACGCGGT CTCGAACGAG GCGCCGCTGT GGTCCCCGCG CTTCCTGGAC
GACGCCGTGG CCCGCCGCAT CCAGCGCGAG CTGGTGAAGC TGGCCGGCAG CGTCCGCGAC
GACCAGAACC ACCCGGTGCG CAAGGCCCTG GACCGGTTCA TGGCCGACTA CGCCGAGGAG
CTGCGGACCG ACCCGGAGAC CCGCCGCCGC GTCGACAAGC TCAAGACCGA AGTGCTCGAA
CACCACGAGC TGCAGGGCGT CGTCGCCTCC GGCTGGACCG CCATGCGCCA GGCGGTGATA
GACGCCGCCG AGGATCCCGA CAGCGACCTG CAGGCGCGCG CCCGCGACGG GCTGCAGAGC
CTCGGGCGCC GCCTGGAGAC CGACACCGCC ATGCAGGAGA AGGCCGACGG CTGGATCCGC
GAGGTCGCGG TCCACCTGGT GACCACCTAC CGCCAGGAGA TCACGTCCCT GATCACCGAC
ACCGTCGCGG CCTGGGACGG CCCGGCCACC TCCCGCAAGA TCGAGCTCCA GGTCGGCCGC
GACCTGCAGT TCATCCGGAT CAACGGCACG GTGGTCGGCG CGCTGGCCGG CTTGGTGATC
TACGCGGTCA CCCAGCTCGC GTTCTGA
 
Protein sequence
MTIVTKARPS DPLTPSELQK RSGMRRMKSV ATGFLLAAAI VYITMRILQN HGVHGWTGYV 
EAAAEAGMVG GLADWFAVTA LFKHPLGVPI PHTAIIPNRK DQFGEGLGTF VGENFLSEDV
IRSRLSALGI SRRTGQWLSQ PENAARVTKE LATAVRGVLT VLRDEDIQKI LGDAVAVRLA
KADLATPLGN VLQRLTESGN HHQVVDMVAA RAHDWLEAHP EAIGNAVSNE APLWSPRFLD
DAVARRIQRE LVKLAGSVRD DQNHPVRKAL DRFMADYAEE LRTDPETRRR VDKLKTEVLE
HHELQGVVAS GWTAMRQAVI DAAEDPDSDL QARARDGLQS LGRRLETDTA MQEKADGWIR
EVAVHLVTTY RQEITSLITD TVAAWDGPAT SRKIELQVGR DLQFIRINGT VVGALAGLVI
YAVTQLAF