Gene Caci_2459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2459 
Symbol 
ID8333808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2779595 
End bp2781145 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content71% 
IMG OID644955612 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003113218 
Protein GI256391654 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAGCG AGTCCGGGAC CGGACCGAAC CAGATGTCGA CCCCCGCCGC CGGGGGCACC 
ACCACCTTAA GCCCGACAAG ACACGAGCGT ACGGCCGGCG CTGCGAGCGC CCCGGCCGGC
AACCGCCGGT CGGGGCTGAT CCTGGCCACG GTGCTCGTCG GCTACTTCAT GGCGCTGCTG
GACGGCTCGA TCGTCAACGT GGCGCTGCCG AGCATCCACG AGAAGCTGCA CGCCTCCGGC
GCCGGCCTGC AGATGGTCGC CGCCGGCTAC ATCATCGCCT ACGCGGTGCT GCTGGTGACC
GGCGCGCGCC TGGGCCGGAT CCTGGGCCAC GAACGGCTGT TCAAGTCCGG ACTGGTCGGC
TTCACCATCG CCTCGCTGGC CTGCGGGCTG GCCCAGAGCA CCGGCGAGCT CATCATCTTC
CGGGTGATCC AGGGCATAGC CGCGGCCGTG ATGCTGCCGC AGGTCCTGAG CCTGATCCAG
CAGACCTTCC AGGGCGAGGC CCGCGCCAAG GCGATGAGCG CCTGGACCGC GGTGCTGGCC
TCCGGGATCG TGGTCGGGCA GGTGCTCGGC GGCATCCTGG TGACCGCGAA CCTGTTCGGG
TGGTCGTGGC GCCCGGTGTT CCTGGTGAAC GTGCCGATCG GCATCGTGCT GTACATCGCG
GCGATCCGCT CGCTGCCCTC GGTCAAGCCG CAGAACAGCG CGGCGGGCAA CAAGGTGGAC
CTGGCCGGCG TGCTGACGCT GTCCCCGACG ATCCTGGCGC TGGTCGTGCC GCTGGTCCTG
GGCCACGACG AGCACTGGCC GCTGTGGGGC TGGGTGCTGC TGGCCGCGTC CGTCCCGCTG
CTCGCCCTGT TCCTGGCCGT CGAGCGCCGG GTGGCGCGCC GCGGCGACTC CCCGATCCTG
CCCGGGCGCA TCCTGCAGAT GTCGGGCATG AAGCCCTCGC TGATCGTGAT CTTCCTGACC
ATGGTCGTCT ACGCCGGCAA CCTGTTCGCC ACCGCGATCC ACCTGCAGGG CACCCTGGGC
TTCAGCGCGC TGAAGACCGG CCTGGCCTTC GCCCCCTGCG CCGCGACCTT CGGCCTGGTG
AGCTACTTCT GGCGCCGGAT CCCGGCGCAC CTGGTCCGGC GCATGTCGTT CCTGGGCCTG
CTGATCGGCG CGGCGGCCAC CGCGGCGCAG ATCTGGATGT TCAAGGACGG CGGCTACGGC
GGCGTGTGGT TCTACCTGAA CCAGCTGGTC TACGGCTTCG GCATCGGTAT CGCCAACGCC
CCGACCATGA CCCTGGCCCT GATGCGGGTC CCGGTCGCCG ACGCCTCGGA CGCCTCGGGC
ACGCTGGCGA CGAACGCGCA GCTGGCCCAG GTGGTCGGCA TCGCCTCCCT CGGCACGCTG
TACCTGACGG TGGCCGCCGG CCACGCGGTG CACGCCGCGG GACACGCGAT GGCGGTGCTG
TCCGGCGCCG GAGTGGTCGT GACGCTGCTG GCGGCGGTGT TCTCCTTCCA CCTGTACCGC
TTGGACAAGC ACGAGCGGGC CGCTACGGCC GCCGGGGCTG CGGCGGTGTG A
 
Protein sequence
MLSESGTGPN QMSTPAAGGT TTLSPTRHER TAGAASAPAG NRRSGLILAT VLVGYFMALL 
DGSIVNVALP SIHEKLHASG AGLQMVAAGY IIAYAVLLVT GARLGRILGH ERLFKSGLVG
FTIASLACGL AQSTGELIIF RVIQGIAAAV MLPQVLSLIQ QTFQGEARAK AMSAWTAVLA
SGIVVGQVLG GILVTANLFG WSWRPVFLVN VPIGIVLYIA AIRSLPSVKP QNSAAGNKVD
LAGVLTLSPT ILALVVPLVL GHDEHWPLWG WVLLAASVPL LALFLAVERR VARRGDSPIL
PGRILQMSGM KPSLIVIFLT MVVYAGNLFA TAIHLQGTLG FSALKTGLAF APCAATFGLV
SYFWRRIPAH LVRRMSFLGL LIGAAATAAQ IWMFKDGGYG GVWFYLNQLV YGFGIGIANA
PTMTLALMRV PVADASDASG TLATNAQLAQ VVGIASLGTL YLTVAAGHAV HAAGHAMAVL
SGAGVVVTLL AAVFSFHLYR LDKHERAATA AGAAAV