Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2459 |
Symbol | |
ID | 8333808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2779595 |
End bp | 2781145 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644955612 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003113218 |
Protein GI | 256391654 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAGCG AGTCCGGGAC CGGACCGAAC CAGATGTCGA CCCCCGCCGC CGGGGGCACC ACCACCTTAA GCCCGACAAG ACACGAGCGT ACGGCCGGCG CTGCGAGCGC CCCGGCCGGC AACCGCCGGT CGGGGCTGAT CCTGGCCACG GTGCTCGTCG GCTACTTCAT GGCGCTGCTG GACGGCTCGA TCGTCAACGT GGCGCTGCCG AGCATCCACG AGAAGCTGCA CGCCTCCGGC GCCGGCCTGC AGATGGTCGC CGCCGGCTAC ATCATCGCCT ACGCGGTGCT GCTGGTGACC GGCGCGCGCC TGGGCCGGAT CCTGGGCCAC GAACGGCTGT TCAAGTCCGG ACTGGTCGGC TTCACCATCG CCTCGCTGGC CTGCGGGCTG GCCCAGAGCA CCGGCGAGCT CATCATCTTC CGGGTGATCC AGGGCATAGC CGCGGCCGTG ATGCTGCCGC AGGTCCTGAG CCTGATCCAG CAGACCTTCC AGGGCGAGGC CCGCGCCAAG GCGATGAGCG CCTGGACCGC GGTGCTGGCC TCCGGGATCG TGGTCGGGCA GGTGCTCGGC GGCATCCTGG TGACCGCGAA CCTGTTCGGG TGGTCGTGGC GCCCGGTGTT CCTGGTGAAC GTGCCGATCG GCATCGTGCT GTACATCGCG GCGATCCGCT CGCTGCCCTC GGTCAAGCCG CAGAACAGCG CGGCGGGCAA CAAGGTGGAC CTGGCCGGCG TGCTGACGCT GTCCCCGACG ATCCTGGCGC TGGTCGTGCC GCTGGTCCTG GGCCACGACG AGCACTGGCC GCTGTGGGGC TGGGTGCTGC TGGCCGCGTC CGTCCCGCTG CTCGCCCTGT TCCTGGCCGT CGAGCGCCGG GTGGCGCGCC GCGGCGACTC CCCGATCCTG CCCGGGCGCA TCCTGCAGAT GTCGGGCATG AAGCCCTCGC TGATCGTGAT CTTCCTGACC ATGGTCGTCT ACGCCGGCAA CCTGTTCGCC ACCGCGATCC ACCTGCAGGG CACCCTGGGC TTCAGCGCGC TGAAGACCGG CCTGGCCTTC GCCCCCTGCG CCGCGACCTT CGGCCTGGTG AGCTACTTCT GGCGCCGGAT CCCGGCGCAC CTGGTCCGGC GCATGTCGTT CCTGGGCCTG CTGATCGGCG CGGCGGCCAC CGCGGCGCAG ATCTGGATGT TCAAGGACGG CGGCTACGGC GGCGTGTGGT TCTACCTGAA CCAGCTGGTC TACGGCTTCG GCATCGGTAT CGCCAACGCC CCGACCATGA CCCTGGCCCT GATGCGGGTC CCGGTCGCCG ACGCCTCGGA CGCCTCGGGC ACGCTGGCGA CGAACGCGCA GCTGGCCCAG GTGGTCGGCA TCGCCTCCCT CGGCACGCTG TACCTGACGG TGGCCGCCGG CCACGCGGTG CACGCCGCGG GACACGCGAT GGCGGTGCTG TCCGGCGCCG GAGTGGTCGT GACGCTGCTG GCGGCGGTGT TCTCCTTCCA CCTGTACCGC TTGGACAAGC ACGAGCGGGC CGCTACGGCC GCCGGGGCTG CGGCGGTGTG A
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Protein sequence | MLSESGTGPN QMSTPAAGGT TTLSPTRHER TAGAASAPAG NRRSGLILAT VLVGYFMALL DGSIVNVALP SIHEKLHASG AGLQMVAAGY IIAYAVLLVT GARLGRILGH ERLFKSGLVG FTIASLACGL AQSTGELIIF RVIQGIAAAV MLPQVLSLIQ QTFQGEARAK AMSAWTAVLA SGIVVGQVLG GILVTANLFG WSWRPVFLVN VPIGIVLYIA AIRSLPSVKP QNSAAGNKVD LAGVLTLSPT ILALVVPLVL GHDEHWPLWG WVLLAASVPL LALFLAVERR VARRGDSPIL PGRILQMSGM KPSLIVIFLT MVVYAGNLFA TAIHLQGTLG FSALKTGLAF APCAATFGLV SYFWRRIPAH LVRRMSFLGL LIGAAATAAQ IWMFKDGGYG GVWFYLNQLV YGFGIGIANA PTMTLALMRV PVADASDASG TLATNAQLAQ VVGIASLGTL YLTVAAGHAV HAAGHAMAVL SGAGVVVTLL AAVFSFHLYR LDKHERAATA AGAAAV
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