| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2452 |
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| Symbol | |
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| ID | 8333801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2772495 |
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| End bp | 2773415 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644955605 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_003113211 |
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| Protein GI | 256391647 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0952029 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.728507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGGCG TGTCCGACGA CCTCGATTCC CGTGTGAAGG CCCATCTGGA GCACCTCTCC
GTGGAGCGGG GGCTCAGTGC CAACACCCTT GCCGCGTATC GGAGAGACCT ATCGCGGTAC
AGGGTTTTCT TGGATACGCG GGACCGTGCA AATTTCAGCG ACATCGATCG CGCGGACGTC
TCCGCGTTCC TCGCGAGCCT CCAGGACGGC GCCGCATCGT CCGCCGCCCG CACAATGTCC
GCAGTGCGGG GATTGCACCG GTTCGCCGTG GCGGAAGGCT GGGTCGGTGT CGACGTCAGC
GATGACGTCG CTCCGCCCCA AGTACCCATG CGGCTGCCCA AGGCACTGCC GCTGGACGAT
ATCGAGCGCC TGCTCGCCGC GACCGAGATC GACGAACCCA TGGCGCTGCG GGACAGGGCC
CTGCTGGAGT TCTTGTACAG CACCGGCGCC CGCGTGAGCG AGGCGGTCGC GCTGGACGTG
GACGACATCG ACCGCGAGGA CCGCACGGTA GTCCTGGACG GCAAGGGCGG CAAGCAGCGC
CTCGTCCCCG TCGGCTCCTA CGCCTGCCGG GCGGTCGACG ACTATCTCGT GCGGCTGCGT
CCGGAGCTGA CGCGCAAGGC CCGATCGGGC AACGGCGGGG CGCTGTTCCT CAACGCGCGC
GGCGGTCGGC TGACGCGTCA GGGTGCGTGG ACGGTCCTCG GCGCGGTCGC CGAGCGCGTA
GGGCTCGCAG GCAGGGTTTC CCCGCACACT TTGCGGCACT CCTTCGCGAC CCACCTGCTG
GACGGGGGAG CGGACATCCG CACCGTGCAG GAGCTGCTGG GTCACAGTTC GGCCACGACG
ACCCAGATCT ACACCCGGGT GACTGTCGAC AGACTGCGTG AGGTGTACGC CACGAGCCAT
CCCAGGGCCC TGAACAGCTG A
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| Protein sequence | MNGVSDDLDS RVKAHLEHLS VERGLSANTL AAYRRDLSRY RVFLDTRDRA NFSDIDRADV
SAFLASLQDG AASSAARTMS AVRGLHRFAV AEGWVGVDVS DDVAPPQVPM RLPKALPLDD
IERLLAATEI DEPMALRDRA LLEFLYSTGA RVSEAVALDV DDIDREDRTV VLDGKGGKQR
LVPVGSYACR AVDDYLVRLR PELTRKARSG NGGALFLNAR GGRLTRQGAW TVLGAVAERV
GLAGRVSPHT LRHSFATHLL DGGADIRTVQ ELLGHSSATT TQIYTRVTVD RLREVYATSH
PRALNS
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