| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2450 |
|---|
| Symbol | |
|---|
| ID | 8333799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 2770550 |
|---|
| End bp | 2771665 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644955603 |
|---|
| Product | alanine dehydrogenase |
|---|
| Protein accession | YP_003113209 |
|---|
| Protein GI | 256391645 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0686] Alanine dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00518] alanine dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.188276 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.405567 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTCG GCGTTCCCCG CGAACTCAAG AACAACGAGT ACCGCGTCGC GATCACCCCC
TCCGGGGTCC ATGAGCTGGT CCGCAACGGC CACGAGGTCT TCGTCGAGAA GGACGCCGGC
GCGGGCTCCT CGCTGTCCGA CGAGCAGTAC GTCGCCGCCG GCGCGGCCAT CCTGCCCACC
GCCGACGAGG TGTGGGCCGT CGGCGACCTG ATCCTGAAGG TCAAGGAGCC GATCGCGGCG
GAGTACCACC GCATGCGCCG CGACCAGATC CTGTTCACCT ACCTGCACCT GGCCGCCTCG
CGCGAGTGCA CCGACGCCCT GCTGGACTCG GGCATCACCG CCATCGCCTA TGAGACCGTG
CAGCTGCCCG ACGGCTCCCT GCCGCTGCTC GCCCCGATGT CCGAGGTGGC CGGCCGGATG
GCGGCCCAGG TCGGCGCGGC GACGCTGCAG AAGGCCAACG GCGGCCGCGG CGTGCTGATG
GGCGGCGTGC CCGGCGTGCG GGCCGCGAAC GTGGTCGTCA TCGGCGGCGG CGTGTCCGGC
ATCAACGCCG CGGTCATCGC CAAGGGCATG GGCGCCCAGG TGAAGCTGCT CGACAAGAGC
ATCCACCGGC TGCGCCAGGT CGACGCCGAC CAGTTCGGCG CGCTGCAGAC CCTGGCCTCC
AACGCCTTCG AGATCGAGCA GGCGTGCCTG GAGGCCGACC TGGTCATCGG CGCGGTCCTG
GTCCCCGGCG CCAAGGCGCC CAAGCTGGTC AGCAACGAAC TGGTCTCGCG CATGAAGCCC
GGCTCGGTGC TCGTCGACAT CGCCATCGAC CAGGGCGGCT GCTTCGAGGA CTCGCACCCG
ACCACGCACG CCGAGCCGAC CTTCCAGGTC CACGACTCGG TCTTCTACTG CGTCGCCAAC
ATGCCCGGCG CCGTGCCCTA CACCTCCACC TACGCGCTGA CCAACGTCAC GCTCCCGTAC
GCGGTCGAGA TCGCCAACCA CGGCTGGAAG GAAGCGTGCC AGCGCGACCA CGCCCTGGCC
CTGGGTCTGA ACACGCACGA CGGCCAGCTG ACCTACCCGC AGGTCGGCGA GGCGCACGAC
CTGCCGTCGC TGAAGCTGGA CGAGGTGCTG GCCTAA
|
|---|
| Protein sequence | MKVGVPRELK NNEYRVAITP SGVHELVRNG HEVFVEKDAG AGSSLSDEQY VAAGAAILPT
ADEVWAVGDL ILKVKEPIAA EYHRMRRDQI LFTYLHLAAS RECTDALLDS GITAIAYETV
QLPDGSLPLL APMSEVAGRM AAQVGAATLQ KANGGRGVLM GGVPGVRAAN VVVIGGGVSG
INAAVIAKGM GAQVKLLDKS IHRLRQVDAD QFGALQTLAS NAFEIEQACL EADLVIGAVL
VPGAKAPKLV SNELVSRMKP GSVLVDIAID QGGCFEDSHP TTHAEPTFQV HDSVFYCVAN
MPGAVPYTST YALTNVTLPY AVEIANHGWK EACQRDHALA LGLNTHDGQL TYPQVGEAHD
LPSLKLDEVL A
|
|---|
| |