Gene Caci_2448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2448 
Symbol 
ID8333797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2768207 
End bp2768791 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content70% 
IMG OID644955601 
Productprotein of unknown function ATP binding 
Protein accessionYP_003113207 
Protein GI256391643 
COG category[R] General function prediction only 
COG ID[COG2229] Predicted GTPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.172776 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACG CGACCGCGAC GGCGACCGCC ACCCGGCCGC CGCAGCCGGT GAAGATGGTC 
ATCTCCGGCG GCTTCGGCGT GGGCAAGACC ACCGCCATCG GCGCGGTGAG CGAGATCGAG
CCGCTCACCA CCGAGGCGGC GATCACCGAG GTCGCCGCCG GCGTGGACGA CACCAGCATG
ACCCCCCGCA AGACCACCAC CACCGTGGCG ATGGACTTCG GCTGCCTGAC CCTGGACCCC
ACGCTGAAGC TGTACATCTT CGGCACCCCG GGCCAGGACC GCTTCGGGTT CATGTGGAAG
GACGTGACCA TGGGCGCCCT CGGCGCGCTC GTGGTCGTGG ACTCCCGCCG CCTGGACGAC
TGCTTCCCGG CCGTGGACTA CTTCGAGCGC GACGGGACCC CCTTCGCGAT CGCGGTGAAC
GCCTTCGACG GCGTGCTGTC GCACTCGCTG CCCGCCGTGC GCTCGGCGCT GGACGTCGCG
CCGGAGGTTC CGGTGGTGGC GTTCGACGCG CGCAGCGCGG ATTCGGTGCG CGAGTCGCTC
ATCGTGGTGC TGGAGCATGC TTTGACGCGG GCTCGGGGGT ATTAG
 
Protein sequence
MTDATATATA TRPPQPVKMV ISGGFGVGKT TAIGAVSEIE PLTTEAAITE VAAGVDDTSM 
TPRKTTTTVA MDFGCLTLDP TLKLYIFGTP GQDRFGFMWK DVTMGALGAL VVVDSRRLDD
CFPAVDYFER DGTPFAIAVN AFDGVLSHSL PAVRSALDVA PEVPVVAFDA RSADSVRESL
IVVLEHALTR ARGY