| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2445 |
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| Symbol | |
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| ID | 8333794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2764052 |
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| End bp | 2767282 |
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| Gene Length | 3231 bp |
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| Protein Length | 1076 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644955598 |
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| Product | putative sensor with HAMP domain |
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| Protein accession | YP_003113204 |
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| Protein GI | 256391640 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.448379 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGG GCTCGGGCGC CGACGTCGCC AACACCACCA GACCGGCGGT CCGCAGCCGG
CTGCCGTTCC GGCGCCGCAT GGACCTGCTG GTCGTGCTGC CCACGATCGC CATGGCCGCG
CTGATGACCC CGGTCGCGGT CCACGAGGTC AACGTGGCCG GGCAGTGGAA CTCCGCGGCG
GACTTCCTGT CCTCGTCCAA GTCCGTCAGC CAGCTGATCC AGGACCTCTC GCTGGAGCGG
GACAAGGCCC AGGCGGCGAT GAGCGGCGAC CCGGACAAGG CCACGGAGTA CACCGCCGCG
ATCGCCACCA CCGACACCCA GGTCGCGCAG GTCACCGCGG ACTTCGGCCG GCACGCGACG
CCGACCCTGA CCGCCGCGCT GGCCGCCGTC TCCGACCTGA GCTACGTGCG CGAACTGCCC
GCCCGCGAGG GCATGTCGCA GAACTATGTG CTGCAGGCCC ACGTCCAGCA GCTGGTCGAC
ACCGTCTACG GCGCCATCGA CTCGCAGATG GTCTCGGCCC TGGACTTCGC CGGGCACGCG
GCCGGCGGCG GCCCGGCGGC CTCGCTGGAG GCGGAACTGG CCGCGCTGTA CTCCGGCGAC
ATGGCCGAGA GCCAGCGCGA GGCCTCGCTG ACCGCCTTCG CCTCCGGGCC CACCGAGTAC
AACGCCGGCG AGGAGTACGG CTCCTCCCTG CGCTGGGACC AGGTCGCGCA GGTGCAGTTC
AGTCTGGTGC AGGAAGCCGA CTCGAACTCC GACCGCCGGG CCATCAGCTC CCTGCTCAGC
TCCGCCCAGG CCGAGATCTT CCGGAGCTAC CAGGACAAGG CCGAGGTGAT GTACGGCAAG
GCCTTCGACC CGGTCCGCGG CGTCAACGGC GACACCCAGG TCAACCTGCA GGACATCCAG
ACCCTGAACG ACCGCACCAC ACTGACCACG GCCTTCGAGA CCGCGAGCAA CCAGCGGGCC
GGAGCCGAGG CGCAGATCAC CGACCGCATC ATCGGCCTGG CCCGGGACAA CGCCCAGCAG
GCGGAGATCA CCGTCGCCCT GCTGATCGGC GTCGGGGTGC TCGCCGCCGG CGCGCTGATG
GTGCTCTCCG GGCTGATCCG GCGCTCGGTG GTGCGCCCGG TCGTGGCGCT GACCGGCGCC
GCCACCCGCG TGGCCCGCGC CGCCGCGGCC GACCTGGAAC GCGTCACCGA CGAGGACCTC
GGCGAGCGCG GCGACCTGCC GGAGTTCGAG GCGATCCCGG TGCCGACCGA CGACGAGCTC
GGCGACCTGG CGCAGGCGTT CAACAAGGTG CAGGAGACCG CGCTGCTGAT GCTGGAGCGG
CAGGTCACCA TCCGGCGCAA CACCGCGGAG ATGTTCGGCA ACGTCGGGCA CCGGATCCAC
AACCTCACCG GACGCCAGCT CTCGATCATC GACCAGGTCG AGCGCACCGA GACCGATCCG
GTCCTGCTGG ACCGGCTGTA CCGCATCGAC CACCTCGCGG TGCGCCTGCA GCGCGGCGCC
GACAGCCTGA TCCTGCTCTC CGGCGAGCGC GAGGCGAACA TCTCCGGCGC GCCGATGCGG
CTCACCGACG TGGTGCGCTC GGCCGTCGGC CGTGTCGAGG GCTACCAGCG GGTGGTGCTG
ATCGCCGAGG ACGACGCCAT GGTCGCGCCC TCGGCGGTCG GCGACATGAC CCTGATGGTC
GCCGAACTCG TGGAGAACGC GGTGTCGTTC TCCCCGGCCA GCCAGCGCGT GGAGATCGCG
GTCGGGCTCT CGGCGCGCGG GTTCGTGATC GAGATCGTCG ACCGCGGCAT GGGCATGTCC
CCGGAGCAGA TGGCGCAGGA GAACGCGCGC CTGGTGCGCC GCGAGCGCCT GGACCTGGCG
CCGACGCGGG TGCTGGGACT GTTCGTGGTG GGCCGGCTCT CGGTGCGGAC CGGCGCCGCG
GTGGAGCTGT CGCCGACGAC CGGCGGCGGG ACCACGGCGC GGGTGTACGT GCCCGGATTC
CTGCTCGCCG GACCGGTGAC CGAGGCGGCC GGGATCCGGG CGCCGCGCGG CGACGCCGCC
GAAGCCGCCG CGACCGGCAC GCCGGCCGCG GGCTCGGCGC CCGCCGCCAA CGGGGTCCCG
GCGCTGCCGT CGAGCCCGGC GCAGGCGCAC GCTCAATCGT TGGAGATGCG GGGACGGCCG
CCGCTGACCC CGGCGCAGCC GCTGCACGCG CCGCCGCCGG CCGTGCCGCG CGTCGCCCCA
GCCGCCCCCG CCGCCCCCGC GCTGCCGCCG GGCGCCGAAG GGCTGCCGCG GCGGGTTCCC
GGTGCCACGC AGCCCGCTGA GGCGTTCAGC CTGCCGGCGC CGACGACGGA GTTCGACGCG
TACGCCGCTC CCGGTGCCGC GTCTGCCGGA AACGGCGCCG GACCGGCCGG GACAGCGGGA
ACAGCCGGAA CAGCCGGAAC AGCCCAGCTC CCGCCGTATC AGCCCGCTCC GATCGACCCC
GCCGCGGCGA ACGCCGTCGA CGGCCACGCC GGATCGCCCT CAGCAGCCTC CCTCGCACCG
TCGCCCTCGT ATCAGCCGAT CCAGCCCCAG ACGCCGGCGG GCCACCAGCC CCACCAACCG
CCGACCGCCG GGCCGGACGG CTCCTCGCTC CAGGTGTCAG GCCTCGACGG CCTCGACGCG
CTCGGACAGC CGGGTGCCCT CGACACCCCC GGAGCCCGGT ACTCGCTCGG CCCGCTGGCG
CCGGTGCCGC CCGAAGGCCT CGGCCGGCGG CGCGCGCTGG CCGGCGGCGA GAGCCAGCAC
CTGCCGCACC AGCCCGTGCC CGAGCCGCGC CGGGGGACCG AGATGCTGCC GGTGCGCCGG
CCGCCGGCGG TCCAGACGCC GCCCGGGGCA CCCGCTCCGG AAGCGCCTGG AATGATCCCC
TCCCACCAGC CGGCGCCGGA GCCGCCGCGG TTCGCCGCCG CGCCCCCGCC GGCCGCGCCG
CCCGGCACCG CCGCGCCGAG CGCCACCACC CCGCAACCCG CCGACGGAGC CCTGCCCCGC
CGGGTCCGCA AGACGCCCCC CTCGCACCCG GACTGGCCGA CGACGCAGAT GCCGCCGGTG
ACCGGACCGG TCCCGCCGCA GGACGCGCGG GCCGTGCGGG ACGCGCTGGA GGAGTTCGAA
GCGGGAGTGG AACGAGCGAA CCGCGACAGC GCCGAACAGA TACCGATCCG CCGGCAGTCG
GCCCGCCACG CGGGCCCGAC CACGCCGGAG CGGGACGGGG AAGACCAATA G
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| Protein sequence | MTQGSGADVA NTTRPAVRSR LPFRRRMDLL VVLPTIAMAA LMTPVAVHEV NVAGQWNSAA
DFLSSSKSVS QLIQDLSLER DKAQAAMSGD PDKATEYTAA IATTDTQVAQ VTADFGRHAT
PTLTAALAAV SDLSYVRELP AREGMSQNYV LQAHVQQLVD TVYGAIDSQM VSALDFAGHA
AGGGPAASLE AELAALYSGD MAESQREASL TAFASGPTEY NAGEEYGSSL RWDQVAQVQF
SLVQEADSNS DRRAISSLLS SAQAEIFRSY QDKAEVMYGK AFDPVRGVNG DTQVNLQDIQ
TLNDRTTLTT AFETASNQRA GAEAQITDRI IGLARDNAQQ AEITVALLIG VGVLAAGALM
VLSGLIRRSV VRPVVALTGA ATRVARAAAA DLERVTDEDL GERGDLPEFE AIPVPTDDEL
GDLAQAFNKV QETALLMLER QVTIRRNTAE MFGNVGHRIH NLTGRQLSII DQVERTETDP
VLLDRLYRID HLAVRLQRGA DSLILLSGER EANISGAPMR LTDVVRSAVG RVEGYQRVVL
IAEDDAMVAP SAVGDMTLMV AELVENAVSF SPASQRVEIA VGLSARGFVI EIVDRGMGMS
PEQMAQENAR LVRRERLDLA PTRVLGLFVV GRLSVRTGAA VELSPTTGGG TTARVYVPGF
LLAGPVTEAA GIRAPRGDAA EAAATGTPAA GSAPAANGVP ALPSSPAQAH AQSLEMRGRP
PLTPAQPLHA PPPAVPRVAP AAPAAPALPP GAEGLPRRVP GATQPAEAFS LPAPTTEFDA
YAAPGAASAG NGAGPAGTAG TAGTAGTAQL PPYQPAPIDP AAANAVDGHA GSPSAASLAP
SPSYQPIQPQ TPAGHQPHQP PTAGPDGSSL QVSGLDGLDA LGQPGALDTP GARYSLGPLA
PVPPEGLGRR RALAGGESQH LPHQPVPEPR RGTEMLPVRR PPAVQTPPGA PAPEAPGMIP
SHQPAPEPPR FAAAPPPAAP PGTAAPSATT PQPADGALPR RVRKTPPSHP DWPTTQMPPV
TGPVPPQDAR AVRDALEEFE AGVERANRDS AEQIPIRRQS ARHAGPTTPE RDGEDQ
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