Gene Caci_2427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2427 
Symbol 
ID8333776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2745931 
End bp2746809 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content72% 
IMG OID644955580 
Product20S proteasome A and B subunits 
Protein accessionYP_003113186 
Protein GI256391622 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0638] 20S proteasome, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0676783 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACGC CGTTCTACGT CTCGCCCGAA CAGATCATGA AGGACCGGGC CGAGTATGCC 
CGCAAGGGCA TCTCGCGTGG CCGGTCCGTG GCAGTCATCT TCTATGACAA GGGCATCGTG
TTCGTCGGGG AGAACCCGTC GCGGGCCCTG CACAAGATCT CCGAGATCTA CGACCGCCTC
GCCTTCGCCG CGGCCGGCCG CTACAACGAG TACGAGCAGC TGCGCATCGC CGGCGTCCGG
CACGCCGACA TGCGCGGCTA CGTCTACGAC CGCCGCGACG TCACCGGCCG GGCGCTGGCC
AACACCTACG CCCAGGCGCT GGGCACGATG TTCAGCGAGG GCGCGGGCAA GCCGTATGAG
GTGGAGCTCG CCGTGGCCGA GGTGGGCGAG GCGGCCGCCG ACGACCAGGG CTACCGGATC
ACCTTCGACG GCCAGGTCAC CGACATCCGC GGCTTCCAGG TCCTGGGCGG TGCCGCGGAC
GCGGTGACCC AGGTGCTGGA GTCCTCCTAC GAGGAGAACG CCGCGCTGGA GACGGTCCTG
AACGCCGCGG TCGACGCCCT GGGCCGGGAC GGCACCGAGC CGCGCACGCT GGCGCCGAAC
CAGCTGGAGG TCGCGGTCCT GGAGCGGACC CGCACCCAGG CGCGCAAGTT CCGGCGGATC
TCGGAGAACG CGCTGGCCCG GCTGCTCGGC GTCGCCGGCG ACAGTGCCGG TGAGGGCGAG
GGCGACAGTG AGGACGGGGC GAAGAACGGG GGCGGCGACG CCGGCCAGAC GGGCACCACG
AACCCGCCGG CCGCCAAGTC CGTGCCCGCC GACGACGGCG ACGTGCTCGG CGCCGTCGAC
GACATCCTCG GCGAGGACGG GACTCCTGAG GAGTCCTGA
 
Protein sequence
MTTPFYVSPE QIMKDRAEYA RKGISRGRSV AVIFYDKGIV FVGENPSRAL HKISEIYDRL 
AFAAAGRYNE YEQLRIAGVR HADMRGYVYD RRDVTGRALA NTYAQALGTM FSEGAGKPYE
VELAVAEVGE AAADDQGYRI TFDGQVTDIR GFQVLGGAAD AVTQVLESSY EENAALETVL
NAAVDALGRD GTEPRTLAPN QLEVAVLERT RTQARKFRRI SENALARLLG VAGDSAGEGE
GDSEDGAKNG GGDAGQTGTT NPPAAKSVPA DDGDVLGAVD DILGEDGTPE ES