Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2427 |
Symbol | |
ID | 8333776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2745931 |
End bp | 2746809 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644955580 |
Product | 20S proteasome A and B subunits |
Protein accession | YP_003113186 |
Protein GI | 256391622 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0676783 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGACGC CGTTCTACGT CTCGCCCGAA CAGATCATGA AGGACCGGGC CGAGTATGCC CGCAAGGGCA TCTCGCGTGG CCGGTCCGTG GCAGTCATCT TCTATGACAA GGGCATCGTG TTCGTCGGGG AGAACCCGTC GCGGGCCCTG CACAAGATCT CCGAGATCTA CGACCGCCTC GCCTTCGCCG CGGCCGGCCG CTACAACGAG TACGAGCAGC TGCGCATCGC CGGCGTCCGG CACGCCGACA TGCGCGGCTA CGTCTACGAC CGCCGCGACG TCACCGGCCG GGCGCTGGCC AACACCTACG CCCAGGCGCT GGGCACGATG TTCAGCGAGG GCGCGGGCAA GCCGTATGAG GTGGAGCTCG CCGTGGCCGA GGTGGGCGAG GCGGCCGCCG ACGACCAGGG CTACCGGATC ACCTTCGACG GCCAGGTCAC CGACATCCGC GGCTTCCAGG TCCTGGGCGG TGCCGCGGAC GCGGTGACCC AGGTGCTGGA GTCCTCCTAC GAGGAGAACG CCGCGCTGGA GACGGTCCTG AACGCCGCGG TCGACGCCCT GGGCCGGGAC GGCACCGAGC CGCGCACGCT GGCGCCGAAC CAGCTGGAGG TCGCGGTCCT GGAGCGGACC CGCACCCAGG CGCGCAAGTT CCGGCGGATC TCGGAGAACG CGCTGGCCCG GCTGCTCGGC GTCGCCGGCG ACAGTGCCGG TGAGGGCGAG GGCGACAGTG AGGACGGGGC GAAGAACGGG GGCGGCGACG CCGGCCAGAC GGGCACCACG AACCCGCCGG CCGCCAAGTC CGTGCCCGCC GACGACGGCG ACGTGCTCGG CGCCGTCGAC GACATCCTCG GCGAGGACGG GACTCCTGAG GAGTCCTGA
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Protein sequence | MTTPFYVSPE QIMKDRAEYA RKGISRGRSV AVIFYDKGIV FVGENPSRAL HKISEIYDRL AFAAAGRYNE YEQLRIAGVR HADMRGYVYD RRDVTGRALA NTYAQALGTM FSEGAGKPYE VELAVAEVGE AAADDQGYRI TFDGQVTDIR GFQVLGGAAD AVTQVLESSY EENAALETVL NAAVDALGRD GTEPRTLAPN QLEVAVLERT RTQARKFRRI SENALARLLG VAGDSAGEGE GDSEDGAKNG GGDAGQTGTT NPPAAKSVPA DDGDVLGAVD DILGEDGTPE ES
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