Gene Caci_2424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2424 
Symbol 
ID8333773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2742968 
End bp2744479 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content69% 
IMG OID644955577 
Productprotein of unknown function DUF245 domain protein 
Protein accessionYP_003113183 
Protein GI256391619 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0268594 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGT GGCGAATCAT GGGCACCGAG ACCGAGTACG GCATTTCTGT ACCAGGGAAC 
CCCGGCGCCA ACGCGATGCT GATCTCGTCC CAGATCGTCA ACTCCTACGC CGCGGCCATG
CACCGGGCGC GGCGGGCGCG CTGGGACTTC GAAGAAGAGA ACCCTCTGCG CGACGCCCGC
GGCTTCGACC TGGCCCGCGA CATCGCCGAC GCCAGCCAGC TGACGGACGA GGACGCGGGC
CTGGCCAACG TGATCCTCAC CAACGGCGCG CGGCTGTACG TCGACCACGC ACACCCCGAG
TACTCCTCCC CGGAGGTCAC CAACCCGCGC GACGCGGTGA TCTGGGACAA GGCCGGGGAG
TGGATCATGG CCGAGGCCTC GCGCCGGGCC GCCGAGATCC CGGGCACCGC GCCGATCAAC
CTGTACAAGA ACAACACCGA CAACAAGGGC GCCTCCTACG GCTCGCACGA GAACTACCTC
ATGCAGCGCA GCACGCCCTT CGCCGACATC GTCCGCAACC TGACCCCGTT CTTCGTCTCC
CGGCAGGTGG TCACCGGCGC CGGCCGGGTG GGCGTCGGCC AGGACGGCCG CGCGCACGGC
TTCCAGATCT CCCAGCGCGC CGACTTCTTC GAGGTCGAGG TGGGCCTGGA GACCACCCTC
AAGCGCCCGA TCATCAACAC CCGCGACGAG CCGCACGCCG ACCCCGAGCG CTACCGCCGG
CTGCACGTCA TCATCGGCGA CGCGAACCTG GCCGAGATCT CCATCTATCT CAAGACCGGC
ACCACGGCGC TGGTCCTGGC GATGATCGAG GAGCGCTTCA TGTCCACCGA CCTGTCGGTG
GACTCCCCGG TCCGCACCCT GCACCAGGTC AGCCACGACC CGACCCTGCG CCAGCTCGTG
ACGCTGCGCA GCGGCCGCAA GCTGACCGCG GTGCAGCTGC AGATGGAGTA CTGCGAGCAG
GCCCGCAAGT TCGTGGAGGA CCGCTACGGC TCCGACGTGG ACGACGTCAC CAAGGACGTG
CTGGAGCGCT GGGAGTCGGT GCTCACCCGG CTGGAGTCGG ACCCGATGTC GCTGTCCCGG
GAGCTGGACT GGGTCGCCAA GTACGAGATC CTTCAGGGCT ACCGCAAGCG CGACGGCCTG
GAGTGGGACT CCTCGCGGCT GGAGCTGGTG GACCTGCAGT ACTCCGACGT CCGCCCGGAG
AAGGGCCTGT ACCAGCGTCT GGCGGCCCGC GGGCGCTTCG AGCGCATCAC CACCGACGAG
CAGATCCGCG CGGCCGTGGA CCACCCGCCG GAGGACACCC GGGCGTACTT CCGCGGGCGG
TGCCTGGACA AGTACGCCGA CTCCGTGGCG GCCGCGTCCT GGGACTCGGT GATCTTCGAC
GTGCCCGGCC GGGAGTCGCT GCAGCGGGTC CCGACGCTGG AGCCGACGCG GGGAACCAAA
CAGCACGTCC AAGCGTTGAT CGATCGGAGC CGCACCGCGG AGGATCTGGT ACGGGCTTTG
ACCGAGGGCT GA
 
Protein sequence
MSVWRIMGTE TEYGISVPGN PGANAMLISS QIVNSYAAAM HRARRARWDF EEENPLRDAR 
GFDLARDIAD ASQLTDEDAG LANVILTNGA RLYVDHAHPE YSSPEVTNPR DAVIWDKAGE
WIMAEASRRA AEIPGTAPIN LYKNNTDNKG ASYGSHENYL MQRSTPFADI VRNLTPFFVS
RQVVTGAGRV GVGQDGRAHG FQISQRADFF EVEVGLETTL KRPIINTRDE PHADPERYRR
LHVIIGDANL AEISIYLKTG TTALVLAMIE ERFMSTDLSV DSPVRTLHQV SHDPTLRQLV
TLRSGRKLTA VQLQMEYCEQ ARKFVEDRYG SDVDDVTKDV LERWESVLTR LESDPMSLSR
ELDWVAKYEI LQGYRKRDGL EWDSSRLELV DLQYSDVRPE KGLYQRLAAR GRFERITTDE
QIRAAVDHPP EDTRAYFRGR CLDKYADSVA AASWDSVIFD VPGRESLQRV PTLEPTRGTK
QHVQALIDRS RTAEDLVRAL TEG