Gene Caci_2420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2420 
Symbol 
ID8333769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2738055 
End bp2738810 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content75% 
IMG OID644955573 
ProductHAD superfamily hydrolase 
Protein accessionYP_003113179 
Protein GI256391615 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGAGC TGACCGCGCC GGAGCCGACC GCGCCGGACC GCCGGCCGAT CCTGGTCGTG 
GATTTCGACG GCACCGTCTA CCGCGACGAC AGCCCGGTCC GCTTCTACGC CGAACACGCC
GCCGGCAGCC TGCCCGCCGA GTGGCGCGGG CGCTTCCTGG ACCTGTTCGA GGCCTACCTG
GAGCGCGGGA TTGCCGCAGC GGACCGGGTC GCCGACGAGG CCGCGGCCGC CGTGCTGCGC
GGCTCGGTCG ACGCCTGGGG CGCCGCGGCC GGACTCGCGG CGTTGTCCGG CGTCGCCCCG
GCCGCCACCG AGGAGGCGTT CCTGGCCAGC CGGCAGTACA TGCTGACGGC CGCCTGCCAG
GTCACGGCGG TCCCGGCGCT GGTCGAGGCG ATCGAGAAGC TGCGCGGCAA AGTCCGGGTG
GTCCTGGCGA CCAACAGCCC GGCCGGGGGA CTGGCGCCGC TTCTGGAGCG GCTCGGCATC
GGCGCGCTGT TCGCCGAGGT CGTCTCCGGC GCCAACAAGC CCGAGGGACT GCGGCGCTGG
ATCGCCGCGG AGCTGGCCGG CCGGGAGCCC GGCGAGCTCT TCTCGCTGGG CGACCACTAC
GTCAACGAGA TCGAGCCGGC GATGGCGGTC GGCGCGCGCG CCGGCTACAT CGACCGGTTC
GGCCGCGCCG ACGGTCCCGC GACGGTGACC GCCGCGGTGG TCGAGGACAT CCTGCCCGGC
GTCTTCGCCT GGGCTCGCGC GCTCATAACC CAATAA
 
Protein sequence
MAELTAPEPT APDRRPILVV DFDGTVYRDD SPVRFYAEHA AGSLPAEWRG RFLDLFEAYL 
ERGIAAADRV ADEAAAAVLR GSVDAWGAAA GLAALSGVAP AATEEAFLAS RQYMLTAACQ
VTAVPALVEA IEKLRGKVRV VLATNSPAGG LAPLLERLGI GALFAEVVSG ANKPEGLRRW
IAAELAGREP GELFSLGDHY VNEIEPAMAV GARAGYIDRF GRADGPATVT AAVVEDILPG
VFAWARALIT Q