Gene Caci_2411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2411 
Symbol 
ID8333760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2729120 
End bp2729614 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content72% 
IMG OID644955564 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_003113170 
Protein GI256391606 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0117] Pyrimidine deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCA TCGACGCCGC CTCCCCCCTG TCCAACCGCA CCCGCGGGGA AGACCGCGAA 
TGGCTCAGCA CCGCCGTCGA CCTCGCCTGG CGCTGTCCGC CGGCGCCGGG CGCGTTCAAC
GTCGGGGCGC TGATCGTCGA CGCCGACGAC CGCGAGCTGG CCCGCGGCTG GTCCCGCGAC
ACCGACGAGC ACGTGCACGC CGAGGAGTCG GCGCTGAACA CCCTCGGCCC GAACCACCCG
CGGTTGTCCG GGGCGACCGT CTACTCCTCG CTCGAGCCGT GCTCGATCCG GAAATCCCGG
CCGCTCACCT GCACCCAGCT GATCATCGCC TCCGGTATCC GGCGCGTGGT GTTCGCCTGG
CGCGAGCCGT CGCTGCTGGT CGAGGACTGC CAGGGCGCGG AGCTGCTCCG CGAGGCCGGG
ATCGAGGTCG TCGAGTTCCC GGAGTTCGAG CCGCTGGTCA AGGCCGCCAA CGCGCACCTG
TTCGGCGACG CCTGA
 
Protein sequence
MTTIDAASPL SNRTRGEDRE WLSTAVDLAW RCPPAPGAFN VGALIVDADD RELARGWSRD 
TDEHVHAEES ALNTLGPNHP RLSGATVYSS LEPCSIRKSR PLTCTQLIIA SGIRRVVFAW
REPSLLVEDC QGAELLREAG IEVVEFPEFE PLVKAANAHL FGDA