Gene Caci_2410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2410 
Symbol 
ID8333759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2728371 
End bp2729015 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content76% 
IMG OID644955563 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003113169 
Protein GI256391605 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCCG ACACCCGGGA CCGCCTGCTG CAGGGGACGA TCGACGCCCT GCGGACCCAG 
GGCATCGCCG GGGTGTCGGC CCGGACCATC GCGGCGGCCG CCGGGGTGAA CCAGGCGCTG
GTGTTCTACC ACTTCGGCAG CGTCGACGAA CTGCTCGCGG CGGCGGCCAT GTGGTCGACC
GAGCAGCAGG TGGCCGCCTA CCGGGAGCCG TTCGAGCGGG TGCGCTCGCT GCGGGAGCTG
CAGAAGGTCG GCCGCGAACT GCACACGCGG GAGAGCGCGG CGGGGAACGT CACGGTCCTG
GGACAGATGC TCGCCGGGGC GCAGACGAAC CCGGCGTTCG CCGCGGCGAC GCGCGACGCG
CTGGCGCTGT GGACCGTGGA GATCGAGCGG GTGCTGGCCC GGGTGCTGGC GGACTCCCCG
CTCGGGGAGG TCGCGGACGT GCCGGGGCTG GCGCGCGCGG TGGCGGCGTC CTTCATCGGG
ATGGAGCTGC TGGCGGCCGT CGACCCCGAG GGCGACAAGG CCGCGTTCCG GGCCCTGGAC
CAGCTCGGCG CCCTGCTGGA GTACTTGGAC GACCTGGGTC CGGCCTCGCG GGCGGCGGCG
CGGCGCGCGG TGCGGACCGC CGTGCGGCGG TCGGTGCGCG CGTAG
 
Protein sequence
MSSDTRDRLL QGTIDALRTQ GIAGVSARTI AAAAGVNQAL VFYHFGSVDE LLAAAAMWST 
EQQVAAYREP FERVRSLREL QKVGRELHTR ESAAGNVTVL GQMLAGAQTN PAFAAATRDA
LALWTVEIER VLARVLADSP LGEVADVPGL ARAVAASFIG MELLAAVDPE GDKAAFRALD
QLGALLEYLD DLGPASRAAA RRAVRTAVRR SVRA