Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2410 |
Symbol | |
ID | 8333759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2728371 |
End bp | 2729015 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644955563 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003113169 |
Protein GI | 256391605 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCCG ACACCCGGGA CCGCCTGCTG CAGGGGACGA TCGACGCCCT GCGGACCCAG GGCATCGCCG GGGTGTCGGC CCGGACCATC GCGGCGGCCG CCGGGGTGAA CCAGGCGCTG GTGTTCTACC ACTTCGGCAG CGTCGACGAA CTGCTCGCGG CGGCGGCCAT GTGGTCGACC GAGCAGCAGG TGGCCGCCTA CCGGGAGCCG TTCGAGCGGG TGCGCTCGCT GCGGGAGCTG CAGAAGGTCG GCCGCGAACT GCACACGCGG GAGAGCGCGG CGGGGAACGT CACGGTCCTG GGACAGATGC TCGCCGGGGC GCAGACGAAC CCGGCGTTCG CCGCGGCGAC GCGCGACGCG CTGGCGCTGT GGACCGTGGA GATCGAGCGG GTGCTGGCCC GGGTGCTGGC GGACTCCCCG CTCGGGGAGG TCGCGGACGT GCCGGGGCTG GCGCGCGCGG TGGCGGCGTC CTTCATCGGG ATGGAGCTGC TGGCGGCCGT CGACCCCGAG GGCGACAAGG CCGCGTTCCG GGCCCTGGAC CAGCTCGGCG CCCTGCTGGA GTACTTGGAC GACCTGGGTC CGGCCTCGCG GGCGGCGGCG CGGCGCGCGG TGCGGACCGC CGTGCGGCGG TCGGTGCGCG CGTAG
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Protein sequence | MSSDTRDRLL QGTIDALRTQ GIAGVSARTI AAAAGVNQAL VFYHFGSVDE LLAAAAMWST EQQVAAYREP FERVRSLREL QKVGRELHTR ESAAGNVTVL GQMLAGAQTN PAFAAATRDA LALWTVEIER VLARVLADSP LGEVADVPGL ARAVAASFIG MELLAAVDPE GDKAAFRALD QLGALLEYLD DLGPASRAAA RRAVRTAVRR SVRA
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