| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2402 |
|---|
| Symbol | pyrC |
|---|
| ID | 8333751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 2719038 |
|---|
| End bp | 2720330 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644955555 |
|---|
| Product | dihydroorotase |
|---|
| Protein accession | YP_003113161 |
|---|
| Protein GI | 256391597 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
|---|
| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0460345 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACCA CCTACCTGAT CAAGAACGCG AGCGTCCTGG GCGGCGACCC GCAGGACCTG
CTCCTGCGCG ACGGGATCAT CGCCGACGCC GGCGCCCTGG GCCCGGTCGC CGGCACAGTG
GTGATCGACG CCGGCGGCCT GATCGCCCTG CCCGGCCTGG TCGACCTGCA CACCCACCTG
CGCGAGCCAG GCCGCGAGGA CGCCGAGACC GTCGACACCG GCACCCGGGC CGCGGCCCTC
GGCGGCTTCA CCGCCGTGCA CGCCATGGCC AACACCGACC CGGTCGCCGA CACCGCCGGC
GTGGTCGAGC AGGTCTGGCG CCTGGGCCGC GAGGCCGGGC ACTGCGACGT CTTCCCGGTC
GGCGCGGTCA CCGTGGGCCT GGCCGGCGAG CGGCTGGCCG AGCTCGGCGC GATGGCCGAC
TCCGCCGCCC GGGTGCGGGT CTTCTCCGAC GACGGCAAGT GCGTCTCCGA CGCGAACCTG
ATGCGGCGCG CGCTGGAATA CGTGAAGGCC TTCGACGGCG TGGTCGCGCA GCACGCGCAG
GAGCCGCGGC TGACCGAGGG CGCGCAGATG AACGAGGGCG AGCTGTCCGG GATCCTGGGC
CTGACCGGCT GGCCGGCGGT CGCCGAGGAG GCGGTCATCG CCCGCGACAT CCTGCTGGCC
GCGCACACCA AGTCCCGGCT GCACGTCTGC CACGTCTCCA CGGCCGGCTC GGTGGAGCTG
ATCCGCTGGG CCAAGTCCAA GGGCTACCCG GTCACCGCCG AGGTCACCCC GCACCACCTG
ATCCTCACCG AGGACCTGGT GAAGAGCTAC GACCCGATCT ACAAGGTGAA CCCGCCGCTG
CGCACCGCCG CCGACGTCGA GGCGCTGCGC GCCGGGCTCG CCGACGGCAC CATCGACGCC
GTCGCCACCG ACCACGCCCC GCACCCGCAG GAGGACAAGG ACTGCGAGTG GGCCGCGGCG
GCCATGGGCA TGCTCGGCCT GGAGACCGCG CTGTCCGTGG TGCAGCAGAC CATGGTCGAC
AGCGGCCTGA TGAGCTGGGC CGGCGTCGCC GACCGGATGT CGGTGCGCCC GGCGGCCATC
GGCCAGGTCG AGGACCGGCA CGGCCGCCCG CTGGCGATCG GCGAGCCGGC GAACCTGGTC
CTGGTGGACC CGGCGGCGAA ACGCACCGTG GACCGGACCG GGCTGGCCTC GCTGTCGCAG
AACACCCCGT ATCAGGGGAT GGAGCTGCCC GGCGCGGTCG TCGCGACGTT CCTGCGCGGG
ACCGCGACCG TTCTGGACGG GAAGCTCGCA TGA
|
|---|
| Protein sequence | MSTTYLIKNA SVLGGDPQDL LLRDGIIADA GALGPVAGTV VIDAGGLIAL PGLVDLHTHL
REPGREDAET VDTGTRAAAL GGFTAVHAMA NTDPVADTAG VVEQVWRLGR EAGHCDVFPV
GAVTVGLAGE RLAELGAMAD SAARVRVFSD DGKCVSDANL MRRALEYVKA FDGVVAQHAQ
EPRLTEGAQM NEGELSGILG LTGWPAVAEE AVIARDILLA AHTKSRLHVC HVSTAGSVEL
IRWAKSKGYP VTAEVTPHHL ILTEDLVKSY DPIYKVNPPL RTAADVEALR AGLADGTIDA
VATDHAPHPQ EDKDCEWAAA AMGMLGLETA LSVVQQTMVD SGLMSWAGVA DRMSVRPAAI
GQVEDRHGRP LAIGEPANLV LVDPAAKRTV DRTGLASLSQ NTPYQGMELP GAVVATFLRG
TATVLDGKLA
|
|---|
| |